RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 TBC1D3CQ6IPX1 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 MIS18BP1Q6P0N0 1132 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ZNF66Q6ZN08 573 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 RRAGAQ7L523 313 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 EXOC8Q8IYI6 725 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3Q8IZP1 549 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 C8orf58Q8NAV2 365 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 SRFBP1Q8NEF9 429 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 OSR1Q8TAX0 266 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 ASB12Q8WXK4 309 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TRMT61AQ96FX7 289 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 ZNF845Q96IR2 970 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 CFAP53Q96M91 514 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TRAPPC9Q96Q05 1148 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 FAM167BQ9BTA0 163 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ISCA1Q9BUE6 129 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 DDX23Q9BUQ8 820 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 TRIM2Q9C040 744 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 SEMA4CQ9C0C4 833 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 PRDM16Q9HAZ2 1276 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 SEPSECSQ9HD40 501 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 SAYSD1Q9NPB0 183 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 FLRT1Q9NZU1 646 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 NDUFAF4Q9P032 175 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 KIF17Q9P2E2 1029 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 SRP68Q9UHB9 627 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 DDX19BQ9UMR2 479 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 SLC12A4Q9UP95 1085 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ABCC11Q96J66 1382 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 FANCAO15360 1455 aa2.96□□□□□ -1.93
VPS41-206ENST00000418457 ZNF518AQ6AHZ1 1483 aa2.96□□□□□ -1.93
VPS41-206ENST00000418457 NRXN1Q9ULB1 1477 aa2.96□□□□□ -1.93
VPS41-206ENST00000418457 IL16Q14005 1332 aa2.96□□□□□ -1.93
VPS41-206ENST00000418457 PLCH2O75038 1416 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 QRICH2Q9H0J4 1663 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 MBD3L5A6NJ08 208 aaPredicted RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 C16orf96A6NNT2 1141 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 H0Y3Z8 333 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 MASP2O00187 686 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 PPP6CO00743 305 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 DSCR3O14972 297 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 IPO8O15397 1037 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 IRAK2O43187 625 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 BCAR3O75815 825 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 LATS1O95835 1130 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 TUBB4AP04350 444 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 CYP3A4P08684 503 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 PEPDP12955 493 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 SFPQP23246 707 aaKnown RBP eCLIP2.96□□□□□ -1.94
VPS41-206ENST00000418457 MSNP26038 577 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 MPGP29372 298 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 DDIT3P35638 169 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 PCP4P48539 62 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 PRKAA2P54646 552 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 SLC37A1P57057 533 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 FAM3BP58499 235 aaPredicted RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 CALD1Q05682 793 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 MVPQ14764 893 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 FAM110CQ1W6H9 321 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 ADCK5Q3MIX3 580 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 GALNTL6Q49A17 601 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 CEP78Q5JTW2 689 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 KIAA1614Q5VZ46 1190 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 DGAT2L7PQ6IED9 249 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 DPY19L2P1Q6NXN4 242 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 TMEM88Q6PEY1 159 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 SLC39A5Q6ZMH5 540 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 CLEC17AQ6ZS10 378 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 ZSCAN30Q86W11 494 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 UEVLDQ8IX04 471 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 FTSJ3Q8IY81 847 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 GALNT16Q8N428 558 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 ADPRHL1Q8NDY3 354 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 OR6Y1Q8NGX8 325 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 ZNF398Q8TD17 642 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 GOLGA1Q92805 767 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 CELF1Q92879 486 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 TBC1D20Q96BZ9 403 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 P2RY11Q96G91 374 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 SCLT1Q96NL6 688 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 GPR78Q96P69 363 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 FAM118BQ9BPY3 351 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 TAF1DQ9H5J8 278 aaPredicted RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 PDGFCQ9NRA1 345 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 ADARB2Q9NS39 739 aaKnown RBP2.96□□□□□ -1.94
VPS41-206ENST00000418457 BAG5Q9UL15 447 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 B3GNT3Q9Y2A9 372 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 ZFYVE16Q7Z3T8 1539 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 LMTK2Q8IWU2 1503 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 TSPOAP1O95153 1857 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 UHRF1BP1LA0JNW5 1464 aa2.96□□□□□ -1.94
VPS41-206ENST00000418457 SPATA31A5Q5VU36 1347 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 SPATA31A7Q8IWB4 1347 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 WDR17Q8IZU2 1322 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 TRAPPC8Q9Y2L5 1435 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 PPLO60437 1756 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 EFCAB6Q5THR3 1501 aa2.95□□□□□ -1.94
VPS41-206ENST00000418457 ABCA9Q8IUA7 1624 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms