RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 LRIT1Q9P2V4 623 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 NXF1Q9UBU9 619 aaKnown RBP4.54□□□□□ -1.68
RFC4-205ENST00000418288 IL19Q9UHD0 177 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 CPSF3Q9UKF6 684 aaKnown RBP4.54□□□□□ -1.68
RFC4-205ENST00000418288 CDC42EP3Q9UKI2 254 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 INTS6Q9UL03 887 aaKnown RBP4.54□□□□□ -1.68
RFC4-205ENST00000418288 RAB21Q9UL25 225 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 TRPC5Q9UL62 973 aaPredicted RBP4.54□□□□□ -1.68
RFC4-205ENST00000418288 RIMKLBQ9ULI2 386 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 NENFQ9UMX5 172 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 VWA7Q9Y334 891 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 TRIM17Q9Y577 477 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 NFS1Q9Y697 457 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 SESN1Q9Y6P5 492 aa4.54□□□□□ -1.68
RFC4-205ENST00000418288 AOX1Q06278 1338 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 LOC102723996A0A087X1L8 192 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 CDHR4A6H8M9 788 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 FAM90A8PA6NJQ4 464 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 ENO4A6NNW6 628 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 IFNL4K9M1U5 179 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 GNB5O14775 395 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PSPNO60542 156 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TRIM13O60858 407 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 VPS4BO75351 444 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SLCO2B1O94956 709 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 INHBAP08476 426 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 HMOX1P09601 288 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 ATXN1LP0C7T5 689 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 FAM90A13PP0C7W8 464 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 FAM90A24PP0C7X0 464 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PEPDP12955 493 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TRIM21P19474 475 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 PBLDP30039 288 aaPredicted RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 LRPAP1P30533 357 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 MC5RP33032 325 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 HNF1BP35680 557 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 CASRP41180 1078 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PGDP52209 483 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 HK2P52789 917 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 EFNA5P52803 228 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 MFAP4P55083 255 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 YPEL5P62699 121 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 HMGN5P82970 282 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 PRR5P85299 388 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PTH1RQ03431 593 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 CSTF3Q12996 717 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 SGCGQ13326 291 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 RCN2Q14257 317 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 LEXMQ3ZCV2 418 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 FAM90A2PQ658T7 463 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TMEM81Q6P7N7 255 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 ZCCHC12Q6PEW1 402 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SERPINA13PQ6UXR4 307 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 NFXL1Q6ZNB6 911 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TMEM110Q86TL2 294 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TICAM1Q8IUC6 712 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 IGDCC3Q8IVU1 814 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 FAM185AQ8N0U4 392 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 MMP21Q8N119 569 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SIX6OS1Q8N1H7 587 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PI4KAP1Q8N8J0 262 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 MRPL43Q8N983 215 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 ANKRD20A12PQ8NF67 263 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 NEDD1Q8NHV4 660 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 NPIPB3Q92617 1050 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PPP2R3CQ969Q6 453 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 GFM2Q969S9 779 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 LRRC59Q96AG4 307 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 SAT2Q96F10 170 aaPredicted RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 ZBTB45Q96K62 511 aaPredicted RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 PHACTR3Q96KR7 559 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 LINC00615Q96LM1 132 aaPredicted RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 CFAP53Q96M91 514 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 NLRP4Q96MN2 994 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TMEM209Q96SK2 561 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PAFAH2Q99487 392 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 NPAS1Q99742 590 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SLC25A23Q9BV35 468 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 GLIS2Q9BZE0 524 aaPredicted RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 IMPG2Q9BZV3 1241 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 TRIM7Q9C029 511 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 KRT23Q9C075 422 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 NT5C3AQ9H0P0 336 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SERHL2Q9H4I8 314 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 EPHX3Q9H6B9 360 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 FBRSL1Q9HCM7 1045 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 THAP1Q9NVV9 213 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 EXTL2Q9UBQ6 330 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 FETUBQ9UGM5 382 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 HOOK1Q9UJC3 728 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 TMEM59LQ9UK28 342 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 PLA2G2DQ9UNK4 145 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SLC27A6Q9Y2P4 619 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 MRPS17Q9Y2R5 130 aaKnown RBP4.53□□□□□ -1.68
RFC4-205ENST00000418288 KCNK7Q9Y2U2 307 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 SNX14Q9Y5W7 946 aa4.53□□□□□ -1.68
RFC4-205ENST00000418288 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.52□□□□□ -1.69
RFC4-205ENST00000418288 RNF103-CHMP3A0A140T963 221 aa4.52□□□□□ -1.69
RFC4-205ENST00000418288 FITM1A5D6W6 292 aa4.52□□□□□ -1.69
RFC4-205ENST00000418288 C9orf172C9J069 976 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms