RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 DPYSL2Q16555 572 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 TAZQ16635 292 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 OTUD1Q5VV17 481 aaPredicted RBP13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 C1orf228Q6PIY5 440 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 SCD5Q86SK9 330 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 TAC4Q86UU9 113 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 P3H4Q92791 437 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 PGAP3Q96FM1 320 aaPredicted RBP13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ERP44Q9BS26 406 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ZNF670Q9BS34 389 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 NMUR1Q9HB89 426 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 GDF3Q9NR23 364 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 CALCOCO1Q9P1Z2 691 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 ASIC3Q9UHC3 531 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 MAFFQ9ULX9 164 aa13.58□□□□□ -0.23
HLA-DMB-258ENST00000418107 EEF2KO00418 725 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 LIASO43766 372 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 SEC31AO94979 1220 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 RARGP13631 454 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 KCNA4P22459 653 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 HOXC13P31276 330 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 CARSP49589 748 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 CXCR3P49682 368 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 EIF3EP60228 445 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 LRRC32Q14392 662 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 CSRP2Q16527 193 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 C10orf120Q5SQS8 335 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 STXBP5Q5T5C0 1151 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 TXNDC11Q6PKC3 985 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 SYDE1Q6ZW31 735 aaPredicted RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 LONP2Q86WA8 852 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 VSIG1Q86XK7 387 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 TMC8Q8IU68 726 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 GSPT2Q8IYD1 628 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 PYROXD2Q8N2H3 581 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 TTC8Q8TAM2 541 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 E2F7Q96AV8 911 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 LRRC3Q9BY71 257 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 TKTL2Q9H0I9 626 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 TMEM51Q9NW97 253 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 IL37Q9NZH6 218 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 SFMBT1Q9UHJ3 866 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 NUDT5Q9UKK9 219 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 DNPEPQ9ULA0 475 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 NFU1Q9UMS0 254 aa13.58□□□□□ -0.24
HLA-DMB-258ENST00000418107 USP24Q9UPU5 2620 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 CFAP47Q6ZTR5 3102 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 ZNF487B1APH4 448 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 SPECC1L-ADORA2AF8WAN1 911 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 H7C0C1 242 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 APOC4-APOC2K7ER74 178 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 CHADO15335 359 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 PAPSS2O95340 614 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 APOC2P02655 101 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 CSH1P0DML2 217 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 CSH2P0DML3 217 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 GOT1P17174 413 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 TGM2P21980 687 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 TNFRSF8P28908 595 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 CNR2P34972 360 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 ATP5OP48047 213 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 EPHB3P54753 998 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 MLLT6P55198 1093 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 FCHO2Q0JRZ9 810 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 EFEMP1Q12805 493 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 DARS2Q6PI48 645 aaKnown RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 NPNTQ6UXI9 565 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 BNIPLQ7Z465 357 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 DDX42Q86XP3 938 aaKnown RBP eCLIP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 FAM160A2Q8N612 972 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 HNRNPLLQ8WVV9 542 aaKnown RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 MSANTD3Q96H12 275 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 ZFYVE19Q96K21 471 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 SERPINB11Q96P15 392 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 MAGEB5Q9BZ81 275 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 C8orf33Q9H7E9 229 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 TMPRSS4Q9NRS4 437 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 CWC15Q9P013 229 aaKnown RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 HSFX1Q9UBD0 423 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 SAE1Q9UBE0 346 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 SNX24Q9Y343 169 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 HEY1Q9Y5J3 304 aa13.57□□□□□ -0.24
HLA-DMB-258ENST00000418107 NUP205Q92621 2012 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CNOT1A5YKK6 2376 aaKnown RBP13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 SGK1O00141 431 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 IRAK2O43187 625 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 MSI1O43347 362 aaKnown RBP13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 KRT14P02533 472 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 SLC2A3P11169 496 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 ATF6P18850 670 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 AMPD1P23109 780 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CCR1P32246 355 aa13.56□□□□□ -0.24
HLA-DMB-258ENST00000418107 CTHP32929 405 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms