RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 UPF3AQ9H1J1 476 aaKnown RBP12.64□□□□□ -0.39
UBA3-203ENST00000415609 TLE6Q9H808 572 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 THAP1Q9NVV9 213 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 DSEQ9UL01 958 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 SHROOM3Q8TF72 1996 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 ZNF623O75123 536 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 JCHAINP01591 159 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 CYP11A1P05108 521 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 RPLP2P05387 115 aaKnown RBP12.64□□□□□ -0.39
UBA3-203ENST00000415609 KCNA4P22459 653 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 GRIK3Q13003 919 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 TUSC3Q13454 348 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 MBLAC2Q68D91 279 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 KCTD11Q693B1 232 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 OVOS1Q6IE37 1185 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 DCLRE1AQ6PJP8 1040 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 STRA8Q7Z7C7 330 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBA3-203ENST00000415609 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBA3-203ENST00000415609 VAT1Q99536 393 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 ADAM2Q99965 735 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 TRIM62Q9BVG3 475 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 CADM1Q9BY67 442 aaKnown RBP12.64□□□□□ -0.39
UBA3-203ENST00000415609 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 SIK2Q9H0K1 926 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
UBA3-203ENST00000415609 UBP1Q9NZI7 540 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 C15orf41Q9Y2V0 281 aa12.64□□□□□ -0.39
UBA3-203ENST00000415609 TDRD15B5MCY1 1934 aaKnown RBP12.63□□□□□ -0.39
UBA3-203ENST00000415609 A0A0U1RQF3 1178 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 DFFAO00273 331 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 LYPLA1O75608 230 aaPredicted RBP12.63□□□□□ -0.39
UBA3-203ENST00000415609 USP1O94782 785 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 GSRP00390 522 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 ASGR1P07306 291 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 F7P08709 466 aaPredicted RBP12.63□□□□□ -0.39
UBA3-203ENST00000415609 FGF3P11487 239 aaPredicted RBP12.63□□□□□ -0.39
UBA3-203ENST00000415609 SPRP35270 261 aaPredicted RBP12.63□□□□□ -0.39
UBA3-203ENST00000415609 CENPFP49454 3210 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 SERPINB8P50452 374 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 COG7P83436 770 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 TSPY1Q01534 308 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 PRPSAP1Q14558 356 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 PCLAFQ15004 111 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 ANKRD20A4Q4UJ75 823 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 WASHC2DQ5SRD0 308 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 RINLQ6ZS11 566 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 CMC1Q7Z7K0 106 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 RPAINQ86UA6 219 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 TMEM135Q86UB9 458 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 LRRTM3Q86VH5 581 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 THEM5Q8N1Q8 247 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 GIMAP7Q8NHV1 300 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 SCAMP5Q8TAC9 235 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 USP33Q8TEY7 942 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 RSPH1Q8WYR4 309 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 MCUR1Q96AQ8 359 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 TEKT5Q96M29 485 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 RILPQ96NA2 401 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 RBBP8Q99708 897 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 TACO1Q9BSH4 297 aaKnown RBP12.63□□□□□ -0.39
UBA3-203ENST00000415609 SNX15Q9NRS6 342 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 GABRQQ9UN88 632 aa12.63□□□□□ -0.39
UBA3-203ENST00000415609 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 M0QZQ0 153 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 SEPT4O43236 478 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 DIAPH2O60879 1101 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 PEX11AO75192 247 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 PROCP04070 461 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 SLC10A3P09131 477 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 TPH1P17752 444 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 MAP2K2P36507 400 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 GMPRP36959 345 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 SLC1A6P48664 564 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 FCGRTP55899 365 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 INHBEP58166 350 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 CDK18Q07002 472 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 TRIM32Q13049 653 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 LPIN1Q14693 890 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 MAPRE1Q15691 268 aaKnown RBP12.62□□□□□ -0.39
UBA3-203ENST00000415609 HSF5Q4G112 596 aaPredicted RBP12.62□□□□□ -0.39
UBA3-203ENST00000415609 HSP90AA5PQ58FG0 334 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 FAM91A1Q658Y4 838 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 CD300LGQ6UXG3 332 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 SAPCD2Q86UD0 394 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
UBA3-203ENST00000415609 NSMCE1Q8WV22 266 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 AZIN2Q96A70 460 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 MFSD3Q96ES6 412 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 AGAP2Q99490 1192 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 PKMYT1Q99640 499 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 DENND2DQ9H6A0 471 aaPredicted RBP12.62□□□□□ -0.39
UBA3-203ENST00000415609 RNPEPL1Q9HAU8 725 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 NMRK2Q9NPI5 230 aa12.62□□□□□ -0.39
UBA3-203ENST00000415609 C20orf96Q9NUD7 363 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms