RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 CD163Q86VB7 1156 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 SPATA2LQ8IUW3 424 aaPredicted RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 ZC3H3Q8IXZ2 948 aaKnown RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 DCP1BQ8IZD4 617 aaKnown RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 TMEM86AQ8N2M4 240 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ELMOD1Q8N336 334 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 FGF13Q92913 245 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 FGF14Q92915 247 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 SYAP1Q96A49 352 aaPredicted RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 JAKMIP2Q96AA8 810 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 FAXDC2Q96IV6 333 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ZNF512Q96ME7 567 aaPredicted RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 MED15Q96RN5 788 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 TWNKQ96RR1 684 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 PKMYT1Q99640 499 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ACBD6Q9BR61 282 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 RPP25Q9BUL9 199 aaKnown RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 APOBEC3GQ9HC16 384 aaKnown RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 SMURF1Q9HCE7 757 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 TMEM8AQ9HCN3 771 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ATP13A1Q9HD20 1204 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ASAH2Q9NR71 780 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 SEMA3GQ9NS98 782 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 FAM49BQ9NUQ9 324 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ERVK13-1Q9NX77 482 aa5.17□□□□□ -1.58
VPS41-205ENST00000414632 ARMCX3Q9UH62 379 aaPredicted RBP5.17□□□□□ -1.58
VPS41-205ENST00000414632 TECTAO75443 2155 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SLC12A8A0AV02 714 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 BICDL2A1A5D9 508 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SLC38A8A6NNN8 435 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 C1QTNF9BB2RNN3 333 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PI4K2BG5E9Z4 385 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 H7BY64 318 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 KCNK3O14649 394 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 IKBKBO14920 756 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SLC16A3O15427 465 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 MOSPD3O75425 235 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 C1RP00736 705 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ASS1P00966 412 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 PDGFBP01127 241 aaPredicted RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 CALCAP01258 141 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ESR1P03372 595 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 AMY2AP04746 511 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 RBP3P10745 1247 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 COL6A2P12110 1019 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 LAMP2P13473 410 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PTPN1P18031 435 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 SLC9A1P19634 815 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 AMY2BP19961 511 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PAX3P23760 479 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 GABRR2P28476 465 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PCSK1P29120 753 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ADORA2BP29275 332 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 HOXA9P31269 272 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ATICP31939 592 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 FMO5P49326 533 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 NDST1P52848 882 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 EPHB3P54753 998 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SCAND1P57086 179 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ZXDAP98168 799 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 APBA1Q02410 837 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 HTR4Q13639 388 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TERF2Q15554 542 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 GPR19Q15760 415 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TPD52L1Q16890 204 aaPredicted RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 SGSM1Q2NKQ1 1148 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 GFOD2Q3B7J2 385 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CYP4A22Q5TCH4 519 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 KRT39Q6A163 491 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CXorf57Q6NSI4 855 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 PARM1Q6UWI2 310 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PRR23CQ6ZRP0 262 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 LIMS2Q7Z4I7 341 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 DNAJB7Q7Z6W7 309 aaPredicted RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 RASSF3Q86WH2 238 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PTRH1Q86Y79 214 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 TMC8Q8IU68 726 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ZDHHC14Q8IZN3 488 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 C12orf29Q8N999 325 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TRIML1Q8N9V2 468 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 B3GALNT2Q8NCR0 500 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CCDC150Q8NCX0 1101 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 FBXL13Q8NEE6 735 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 C1orf162Q8NEQ5 155 aaPredicted RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 SHKBP1Q8TBC3 707 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 MYCBPAPQ8TBZ2 947 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SPPL2BQ8TCT7 592 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TMEM174Q8WUU8 243 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SLC35C1Q96A29 364 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 TRMT2BQ96GJ1 504 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 PCED1BQ96HM7 432 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 CNOT6LQ96LI5 555 aaKnown RBP5.16□□□□□ -1.58
VPS41-205ENST00000414632 ZSWIM3Q96MP5 696 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 MED10Q9BTT4 135 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 OSBPL1AQ9BXW6 950 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 B3GNT5Q9BYG0 378 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 PLA2G2FQ9BZM2 168 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 IMPG2Q9BZV3 1241 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 ZNF518BQ9C0D4 1074 aa5.16□□□□□ -1.58
VPS41-205ENST00000414632 SLITRK6Q9H5Y7 841 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms