RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 RARAP10276 462 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 TCF4P15884 667 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 NTSR1P30989 418 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 HOXA6P31267 233 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 ETFBP38117 255 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 CSKP41240 450 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 NOP2P46087 812 aaKnown RBP16.93■□□□□ 0.3
LINC00398-201ENST00000414407 SULT2A1Q06520 285 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 CA9Q16790 459 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 POLNQ7Z5Q5 900 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 TFAP2DQ7Z6R9 452 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 ALLCQ8N6M5 410 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 ALG14Q96F25 216 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 PDLIM2Q96JY6 352 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 GABRG3Q99928 467 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 FEM1AQ9BSK4 669 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 ZWILCHQ9H900 591 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 GPATCH2LQ9NWQ4 482 aa16.93■□□□□ 0.3
LINC00398-201ENST00000414407 CXorf51AA0A1B0GTR3 108 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 ANTXRLA6NF34 631 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 EEF2KO00418 725 aaKnown RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 MZF1P28698 734 aaPredicted RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 SSR1P43307 286 aaKnown RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 VASPP50552 380 aaPredicted RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 TPI1P60174 286 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 KIF5AQ12840 1032 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 ANGPT1Q15389 498 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 CRY1Q16526 586 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 ZNF528Q3MIS6 628 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 KCNT1Q5JUK3 1230 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 LRRC38Q5VT99 294 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 C11orf63Q6NUN7 778 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 KIAA1328Q86T90 577 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 CHPFQ8IZ52 775 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 MAML2Q8IZL2 1156 aaPredicted RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 APCDD1Q8J025 514 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 CAMKK1Q8N5S9 505 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 RTL3Q8N8U3 475 aaKnown RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 TXNDC5Q8NBS9 432 aaKnown RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 OR52K2Q8NGK3 314 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 FAM71BQ8TC56 605 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 KCTD15Q96SI1 283 aaPredicted RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 FAM126AQ9BYI3 521 aaPredicted RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 LACRTQ9GZZ8 138 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 RCOR3Q9P2K3 495 aaPredicted RBP16.92■□□□□ 0.3
LINC00398-201ENST00000414407 SLC8A2Q9UPR5 921 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 ADGRG1Q9Y653 693 aa16.92■□□□□ 0.3
LINC00398-201ENST00000414407 SGK1O00141 431 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 BUB1BO60566 1050 aaPredicted RBP16.91■□□□□ 0.3
LINC00398-201ENST00000414407 ADAM23O75077 832 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 SRPRAP08240 638 aaKnown RBP16.91■□□□□ 0.3
LINC00398-201ENST00000414407 DGKEP52429 567 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 ECT2LQ008S8 904 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 SATB1Q01826 763 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 ZNF234Q14588 700 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 PTPRNQ16849 979 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 SMTNL2Q2TAL5 461 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 PPP6R3Q5H9R7 873 aaPredicted RBP16.91■□□□□ 0.3
LINC00398-201ENST00000414407 RNF219Q5W0B1 726 aaPredicted RBP16.91■□□□□ 0.3
LINC00398-201ENST00000414407 TXNRD3NBQ6F5E7 133 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 RFX8Q6ZV50 586 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 CCDC33Q8N5R6 958 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 HSPH1Q92598 858 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 ACOX2Q99424 681 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 DESI2Q9BSY9 194 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 C2orf49Q9BVC5 232 aaPredicted RBP16.91■□□□□ 0.3
LINC00398-201ENST00000414407 MUC3BQ9H195 1237 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 IRF2BPLQ9H1B7 796 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 MAGEH1Q9H213 219 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 CWC15Q9P013 229 aaKnown RBP16.91■□□□□ 0.3
LINC00398-201ENST00000414407 SALL4Q9UJQ4 1053 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 VPS28Q9UK41 221 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 TFR2Q9UP52 801 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 STON1Q9Y6Q2 735 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 DOCK4Q8N1I0 1966 aa16.91■□□□□ 0.3
LINC00398-201ENST00000414407 TMEM110-MUSTN1A8MSY1 372 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 H3BRJ5 948 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 K7ESF4 209 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 TDGF1P13385 188 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 GOT1P17174 413 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 ARL4AP40617 200 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 ARSEP51690 589 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 NRLP54845 237 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 YBEYP58557 167 aaPredicted RBP16.9■□□□□ 0.3
LINC00398-201ENST00000414407 TAS2R40P59535 323 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 ST8SIA6P61647 398 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 CCZ1BP86790 482 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 CCZ1P86791 482 aaPredicted RBP16.9■□□□□ 0.3
LINC00398-201ENST00000414407 GNA12Q03113 381 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 PDK2Q15119 407 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 IFI16Q16666 785 aaKnown RBP16.9■□□□□ 0.3
LINC00398-201ENST00000414407 CPNE8Q86YQ8 564 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 MAP7D3Q8IWC1 876 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 UMODL1-AS1Q8N2C9 162 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 DCAF4L2Q8NA75 395 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 TPCN2Q8NHX9 752 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 SORCS1Q8WY21 1168 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 TMEM245Q9H330 911 aa16.9■□□□□ 0.3
LINC00398-201ENST00000414407 PCDH18Q9HCL0 1135 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms