RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RNF157Q96PX1 679 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 ACOX2Q99424 681 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 MLPHQ9BV36 600 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 NUDT5Q9UKK9 219 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TMCC3Q9ULS5 477 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TMCO1Q9UM00 188 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 KNDC1Q76NI1 1749 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 FAM47E-STBD1D6RA91 191 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 UBDO15205 165 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 GLUD1P00367 558 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 SLURP2P0DP57 97 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TSHRP16473 764 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 GLUD2P49448 558 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 NAA20P61599 178 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 SPATA20Q8TB22 786 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 STARD8Q92502 1023 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 CATSPERZQ9NTU4 200 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TNPO3Q9Y5L0 923 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 A0A0G2JLL6 359 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 FGFR1P11362 822 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 TKTP29401 623 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 MSLNQ13421 630 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 NEPROQ6NW34 567 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 BNC2Q6ZN30 1099 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 PRRT2Q7Z6L0 340 aaPredicted RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 B4GALNT2Q8NHY0 566 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 DIS3LQ8TF46 1054 aaKnown RBP17.6■□□□□ 0.41
PHRF1-202ENST00000413872 CYGBQ8WWM9 190 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 ST6GALNAC4Q9H4F1 302 aa17.6■□□□□ 0.41
PHRF1-202ENST00000413872 HPGDP15428 266 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 PPP2R1BP30154 601 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 CEP70Q8NHQ1 597 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 CXorf40AQ8TE69 158 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 OMDQ99983 421 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 MFSD1Q9H3U5 465 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 ZDHHC6Q9H6R6 413 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-202ENST00000413872 A0A088AWK7 358 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 SEPT4O43236 478 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 TGFB1I1O43294 461 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 ALBP02768 609 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 H2AFXP16104 143 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-202ENST00000413872 ZNF10P21506 573 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-202ENST00000413872 RRM2P31350 389 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 FMO1Q01740 532 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 CYP2A13Q16696 494 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 C16orf87Q6PH81 154 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 CENPLQ8N0S6 344 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-202ENST00000413872 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 ARMC7Q9H6L4 198 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 RWDD3Q9Y3V2 267 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 CLUHO75153 1309 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 NUMBP49757 651 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 MAML3Q96JK9 1138 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 NRDE2Q9H7Z3 1164 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 NINJ2Q9NZG7 142 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 AKAP7Q9P0M2 348 aaPredicted RBP17.59■□□□□ 0.41
PHRF1-202ENST00000413872 MOXD2PA6NHM9 499 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 CCNE2O96020 404 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 SERPINB5P36952 375 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 FAM46CQ5VWP2 391 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 RIPK3Q9Y572 518 aa17.59■□□□□ 0.41
PHRF1-202ENST00000413872 ELNP15502 786 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 CYP3A5P20815 502 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 CALB2P22676 271 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 KRT20P35900 424 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 RPAINQ86UA6 219 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 TMCO5AQ8N6Q1 288 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 RIN3Q8TB24 985 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 CACNA2D2Q9NY47 1150 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 BTBD7Q9P203 1132 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 SFMBT1Q9UHJ3 866 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 GJB6O95452 261 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 CXCL14O95715 111 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 SMAD3P84022 425 aaKnown RBP17.58■□□□□ 0.41
PHRF1-202ENST00000413872 KYAT3Q6YP21 454 aaKnown RBP17.58■□□□□ 0.41
PHRF1-202ENST00000413872 NLGN2Q8NFZ4 835 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 MYCBPAPQ8TBZ2 947 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 DPY30Q9C005 99 aa17.58■□□□□ 0.41
PHRF1-202ENST00000413872 NXF3Q9H4D5 531 aaKnown RBP17.58■□□□□ 0.41
PHRF1-202ENST00000413872 MON2Q7Z3U7 1717 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 CPA2P48052 419 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 KCNMA1Q12791 1236 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 PGS1Q32NB8 556 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 TJAP1Q5JTD0 557 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 LYPLAL1Q5VWZ2 237 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 BBS12Q6ZW61 710 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 RD3Q7Z3Z2 195 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 SRLQ86TD4 932 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 KLHL28Q9NXS3 571 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 IL2P60568 153 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 PAGE2BQ5JRK9 111 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 ZNF662Q6ZS27 426 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 NKAPQ8N5F7 415 aaKnown RBP17.58■□□□□ 0.4
PHRF1-202ENST00000413872 C4orf32Q8N8J7 132 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 MED8Q96G25 268 aa17.58■□□□□ 0.4
PHRF1-202ENST00000413872 FAM126AQ9BYI3 521 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms