RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ZDHHC2Q9UIJ5 367 aa14.92□□□□□ -0.02
SEMA3F-202ENST00000413852 DPEP1P16444 411 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 SLC6A3Q01959 620 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 TMEM62Q0P6H9 643 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 TMED1Q13445 227 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 IER5Q5VY09 327 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 LAYNQ6UX15 382 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 TIFABQ6ZNK6 161 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 SEPT1Q8WYJ6 367 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 LENG1Q96BZ8 264 aaPredicted RBP14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 DGCR14Q96DF8 476 aaKnown RBP14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 ZBED3Q96IU2 234 aaPredicted RBP14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 TDRKHQ9Y2W6 561 aaKnown RBP14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 RNASEH2AO75792 299 aaKnown RBP14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 SLC5A2P31639 672 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 RALGDSQ12967 914 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 SEMA5AQ13591 1074 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 PDGFCQ9NRA1 345 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 DCDC2Q9UHG0 476 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 SLC39A10Q9ULF5 831 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 BARX2Q9UMQ3 279 aaPredicted RBP14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 SNX10Q9Y5X0 201 aa14.91□□□□□ -0.02
SEMA3F-202ENST00000413852 PLOD2O00469 737 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 PFDN1O60925 122 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 SOX11P35716 441 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 MAGEA6P43360 314 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 HARS2P49590 506 aaKnown RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 NAGLUP54802 743 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 PITRM1Q5JRX3 1037 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 FKBP1CQ5VVH2 108 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 LCLAT1Q6UWP7 414 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 CYP2R1Q6VVX0 501 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 PID1Q7Z2X4 250 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 FBXO16Q8IX29 292 aaPredicted RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 RIN3Q8TB24 985 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 C18orf25Q96B23 403 aaPredicted RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 FAM149B1Q96BN6 582 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 SLC4A5Q9BY07 1137 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 SENP6Q9GZR1 1112 aaPredicted RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 TLL2Q9Y6L7 1015 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 ZNF638Q14966 1978 aaKnown RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 LMO2P25791 158 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 EPHX2P34913 555 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 IL23RQ5VWK5 629 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 ZNF567Q8N184 647 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 OR6B3Q8NGW1 331 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 CDKL2Q92772 493 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 KIF12Q96FN5 646 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 QKIQ96PU8 341 aaKnown RBP eCLIP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 NT5C1AQ9BXI3 368 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 CHRAC1Q9NRG0 131 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 DNAAF2Q9NVR5 837 aaKnown RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 PIGNO95427 931 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 C2P06681 752 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 TPSB2P20231 275 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 BAG6P46379 1132 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 NME3Q13232 169 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 TPSAB1Q15661 275 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 ZNF423Q2M1K9 1284 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 ARL13AQ5H913 290 aaPredicted RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 CATSPERGQ6ZRH7 1159 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 GK5Q6ZS86 529 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 DNAAF3Q8N9W5 541 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 RAB3IL1Q8TBN0 382 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 LRRC39Q96DD0 335 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 HSPBAP1Q96EW2 488 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 CERS2Q96G23 380 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 FZD8Q9H461 694 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 IARS2Q9NSE4 1012 aaKnown RBP14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 RIMS3Q9UJD0 308 aa14.9□□□□□ -0.02
SEMA3F-202ENST00000413852 A0A0A0MRY4 1105 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 C7orf72A4D263 438 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 CDK4P11802 303 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 ETFBP38117 255 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 RPL5P46777 297 aaKnown RBP14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 GRM1Q13255 1194 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 MAP7Q14244 749 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 TMEM132DQ14C87 1099 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 KDELC2Q7Z4H8 507 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 MYO1HQ8N1T3 1032 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 CCNYL1Q8N7R7 359 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 SCYL1Q96KG9 808 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 SPATA13Q96N96 652 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 ADA2Q9NZK5 511 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 PCDHB12Q9Y5F1 795 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 FAM72CH0Y354 149 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 CASQ2O14958 399 aaPredicted RBP14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 ALDH1A2O94788 518 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 COG7P83436 770 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 ADGRE1Q14246 886 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 FAM72AQ5TYM5 149 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 FAM72DQ6L9T8 149 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 FAM72BQ86X60 149 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 MICALL2Q8IY33 904 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 JADE3Q92613 823 aa14.89□□□□□ -0.03
SEMA3F-202ENST00000413852 KCNK16Q96T55 309 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms