RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 AP5Z1O43299 807 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 SRGAP2O75044 1071 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 RRM1P23921 792 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 STK19P49842 368 aaPredicted RBP19.39■□□□□ 0.69
TRIM56-202ENST00000412507 PLK1P53350 603 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 OXCT1P55809 520 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 RPL7AP62424 266 aaKnown RBP19.39■□□□□ 0.69
TRIM56-202ENST00000412507 RNF219Q5W0B1 726 aaPredicted RBP19.39■□□□□ 0.69
TRIM56-202ENST00000412507 LRSAM1Q6UWE0 723 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 STRADAQ7RTN6 431 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 FAM172AQ8WUF8 416 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 CPLX3Q8WVH0 158 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 PIGKQ92643 395 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 RMDN1Q96DB5 314 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 MCEEQ96PE7 176 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 VPS45Q9NRW7 570 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 MPP6Q9NZW5 540 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 USP36Q9P275 1121 aaKnown RBP19.39■□□□□ 0.69
TRIM56-202ENST00000412507 SLCO3A1Q9UIG8 710 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 DOCK9Q9BZ29 2069 aa19.39■□□□□ 0.69
TRIM56-202ENST00000412507 A0A1W2PQJ5 194 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 TTC34A8MYJ7 566 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 PRR5-ARHGAP8B1AHC4 643 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 DDX3XO00571 662 aaKnown RBP eCLIP19.38■□□□□ 0.693e-8■■■■□ 22.8
TRIM56-202ENST00000412507 CCP110O43303 1012 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 GDF9O60383 454 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ACADMP11310 421 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ADRA1BP35368 520 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ID4P47928 161 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 TPMTP51580 245 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 HDAC4P56524 1084 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ARHGAP8P85298 464 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 RSPO4Q2I0M5 234 aaPredicted RBP19.38■□□□□ 0.69
TRIM56-202ENST00000412507 HNRNPA1L2Q32P51 320 aaKnown RBP19.38■□□□□ 0.69
TRIM56-202ENST00000412507 SPDYCQ5MJ68 293 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 PPP1R15BQ5SWA1 713 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ARTNQ5T4W7 220 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ACBD5Q5T8D3 534 aaPredicted RBP19.38■□□□□ 0.69
TRIM56-202ENST00000412507 PPP1R2P3Q6NXS1 205 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 KDM1BQ8NB78 822 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ALG14Q96F25 216 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 VCPIP1Q96JH7 1222 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 FEM1AQ9BSK4 669 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 XPO4Q9C0E2 1151 aaKnown RBP19.38■□□□□ 0.69
TRIM56-202ENST00000412507 TBC1D30Q9Y2I9 924 aa19.38■□□□□ 0.69
TRIM56-202ENST00000412507 ITIH6Q6UXX5 1313 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 IGLV3-10A0A075B6K4 115 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 ATMINO43313 823 aaPredicted RBP19.37■□□□□ 0.69
TRIM56-202ENST00000412507 SIN3BO75182 1162 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 NDUFS2O75306 463 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 RHOCP08134 193 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 ZNF143P52747 638 aaPredicted RBP19.37■□□□□ 0.69
TRIM56-202ENST00000412507 SULT2A1Q06520 285 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 ARL13BQ3SXY8 428 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 TCEAL6Q6IPX3 200 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 DCUN1D2Q6PH85 259 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 TFAP2DQ7Z6R9 452 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 CCDC185Q8N715 623 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 C12orf50Q8NA57 414 aaPredicted RBP19.37■□□□□ 0.69
TRIM56-202ENST00000412507 TCEAL3Q969E4 200 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 TOE1Q96GM8 510 aaKnown RBP19.37■□□□□ 0.69
TRIM56-202ENST00000412507 PPP1R9BQ96SB3 815 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 MAGEB5Q9BZ81 275 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 MUC3BQ9H195 1237 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 FBRSQ9HAH7 460 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 WSB2Q9NYS7 404 aaPredicted RBP19.37■□□□□ 0.69
TRIM56-202ENST00000412507 VPS28Q9UK41 221 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 OR51B4Q9Y5P0 310 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 CACNA1EQ15878 2313 aa19.37■□□□□ 0.69
TRIM56-202ENST00000412507 DCHS1Q96JQ0 3298 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 ATXN2Q99700 1313 aaKnown RBP19.36■□□□□ 0.69
TRIM56-202ENST00000412507 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.36■□□□□ 0.69
TRIM56-202ENST00000412507 ANKRD62A6NC57 917 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 GZMAP12544 262 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 ITPKAP23677 461 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 CD6P30203 668 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 RPS14P62263 151 aaKnown RBP19.36■□□□□ 0.69
TRIM56-202ENST00000412507 ZBED6P86452 979 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 ZNF33AQ06730 810 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 AASDHQ4L235 1098 aaPredicted RBP19.36■□□□□ 0.69
TRIM56-202ENST00000412507 TDRD12Q587J7 1177 aaKnown RBP19.36■□□□□ 0.69
TRIM56-202ENST00000412507 LYSMD4Q5XG99 296 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 HGSNATQ68CP4 663 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 FAM124AQ86V42 546 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 SLC41A1Q8IVJ1 513 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 RXFP3Q9NSD7 469 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 TMEM74BQ9NUR3 256 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 OR12D3Q9UGF7 316 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 CAPN11Q9UMQ6 739 aa19.36■□□□□ 0.69
TRIM56-202ENST00000412507 PLXNA2O75051 1894 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 EDDM13A0A1B0GTR0 161 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 PATE3B3GLJ2 98 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 FOXD2O60548 495 aaPredicted RBP19.35■□□□□ 0.69
TRIM56-202ENST00000412507 RTN2O75298 545 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 FTLP02792 175 aaPredicted RBP19.35■□□□□ 0.69
TRIM56-202ENST00000412507 GYPCP04921 128 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 OXTRP30559 389 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 NNMTP40261 264 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 OGDHQ02218 1023 aa19.35■□□□□ 0.69
TRIM56-202ENST00000412507 MAMLD1Q13495 774 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms