RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SETD3Q86TU7 594 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-210ENST00000412342 CPNE8Q86YQ8 564 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 TMEM139Q8IV31 216 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 ZNF564Q8TBZ8 553 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-210ENST00000412342 CTNNBL1Q8WYA6 563 aaPredicted RBP13.54□□□□□ -0.24
HDAC8-210ENST00000412342 PSMB7Q99436 277 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 FEM1AQ9BSK4 669 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 SNRNP25Q9BV90 132 aaKnown RBP13.54□□□□□ -0.24
HDAC8-210ENST00000412342 NDFIP2Q9NV92 336 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 UVRAGQ9P2Y5 699 aa13.54□□□□□ -0.24
HDAC8-210ENST00000412342 TCRBV21S2A2A0A5A6 115 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 HRO43593 1189 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 RNF8O76064 485 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 MTA2O94776 668 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 ATP5BP06576 529 aaKnown RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 HLA-EP13747 358 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 RHOQP17081 205 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 GABRG2P18507 467 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 OXCT1P55809 520 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 SRSF5Q13243 272 aaKnown RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 PIGHQ14442 188 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 TCEAL1Q15170 157 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 TXNRD3NBQ6F5E7 133 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 ANO7Q6IWH7 933 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 CCDC117Q8IWD4 279 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 KDM1BQ8NB78 822 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 TBC1D31Q96DN5 1066 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 RETREG1Q9H6L5 497 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 POLMQ9NP87 494 aaPredicted RBP13.53□□□□□ -0.24
HDAC8-210ENST00000412342 OSGEPQ9NPF4 335 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 TMEM248Q9NWD8 314 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 IMPACTQ9P2X3 320 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 IP6K2Q9UHH9 426 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 INTUQ9ULD6 942 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 USP18Q9UMW8 372 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 AP4E1Q9UPM8 1137 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
HDAC8-210ENST00000412342 A0A0D9SEW6 157 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 ILVBLA1L0T0 632 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 SOWAHDA6NJG2 315 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 WASH4PA8MWX3 477 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 AXIN1O15169 862 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 RHOCP08134 193 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 SRPRAP08240 638 aaKnown RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 DESP17661 470 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 NDUFV2P19404 249 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 PLA2G5P39877 138 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 NUMBP49757 651 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 COPAP53621 1224 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 CAMK2GQ13555 558 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 E2F5Q15329 346 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 C6orf118Q5T5N4 469 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 ERMARDQ5T6L9 678 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 RNF219Q5W0B1 726 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 ZC3H14Q6PJT7 736 aaKnown RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 SERPINA13PQ6UXR4 307 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 ZNF783Q6ZMS7 281 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 PSTKQ8IV42 348 aaKnown RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 CCDC170Q8IYT3 715 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 ZNF366Q8N895 744 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 NCAPGQ9BPX3 1015 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 EPC1Q9H2F5 836 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 NOL6Q9H6R4 1146 aaKnown RBP13.52□□□□□ -0.25
HDAC8-210ENST00000412342 CTTNBP2NLQ9P2B4 639 aa13.52□□□□□ -0.25
HDAC8-210ENST00000412342 TNRC6BQ9UPQ9 1833 aaKnown RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 EIF3CLB5ME19 914 aaKnown RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 MYO1FO00160 1098 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 PRPSAP2O60256 369 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 ZMPSTE24O75844 475 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 PROSCO94903 275 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 MOCS3O95396 460 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 OR1E1P30953 314 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 CNR2P34972 360 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 MAPKAPK2P49137 400 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 STK19P49842 368 aaPredicted RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 SULT2A1Q06520 285 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 DPYSL2Q16555 572 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 HNRNPA1L2Q32P51 320 aaKnown RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 FNDC3BQ53EP0 1204 aaKnown RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 RWDD4Q6NW29 188 aaKnown RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 TMTC1Q8IUR5 882 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 RTL3Q8N8U3 475 aaKnown RBP13.51□□□□□ -0.25
HDAC8-210ENST00000412342 DCAF4L2Q8NA75 395 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 SUMF1Q8NBK3 374 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 SPC24Q8NBT2 197 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 OR7D4Q8NG98 312 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 SLC35G2Q8TBE7 412 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 HMGB4Q8WW32 186 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 GAB3Q8WWW8 586 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 ATRIPQ8WXE1 791 aa13.51□□□□□ -0.25
HDAC8-210ENST00000412342 RFFLQ8WZ73 363 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms