RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 VANGL2Q9ULK5 521 aa16.26■□□□□ 0.19
HOXD3-202ENST00000410016 C9IYK1 514 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 ZBTB24O43167 697 aaPredicted RBP16.25■□□□□ 0.19
HOXD3-202ENST00000410016 PDHA1P08559 390 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 RALBP11234 206 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 GJA9P57773 515 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 FRG1Q14331 258 aaKnown RBP16.25■□□□□ 0.19
HOXD3-202ENST00000410016 GPRIN1Q7Z2K8 1008 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 ANKRD23Q86SG2 305 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 ZMIZ2Q8NF64 920 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 AZIN2Q96A70 460 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 LENG1Q96BZ8 264 aaPredicted RBP16.25■□□□□ 0.19
HOXD3-202ENST00000410016 KCNK16Q96T55 309 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 SMOQ99835 787 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 CACNG4Q9UBN1 327 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 SOX13Q9UN79 622 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 RAD54BQ9Y620 910 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 DNAH12Q6ZR08 3092 aa16.25■□□□□ 0.19
HOXD3-202ENST00000410016 E2F8A0AVK6 867 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 USP1O94782 785 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 KLHL2O95198 593 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 FAM200BP0CF97 657 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 CPA3P15088 417 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 CYP2B6P20813 491 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 LIMK2P53671 638 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 CRYBB1P53674 252 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 ABCE1P61221 599 aaKnown RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 ITGA9Q13797 1035 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 KBTBD2Q8IY47 623 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 TNS4Q8IZW8 715 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 SHKBP1Q8TBC3 707 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 PGAP3Q96FM1 320 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 MCMBPQ9BTE3 642 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 DNAJC28Q9NX36 388 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 ADAM28Q9UKQ2 775 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 LRCH1Q9Y2L9 728 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 DPPA5A6NC42 116 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 NCAM2O15394 837 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 F7P08709 466 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 SPRP35270 261 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 CACNA2D1P54289 1103 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 MRPS35P82673 323 aaKnown RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 KLC1Q07866 573 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 CCDC153Q494R4 210 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 ANKRD20A4Q4UJ75 823 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 RAB41Q5JT25 222 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 OLFML2BQ68BL8 750 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 PDZD4Q76G19 769 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 STRA8Q7Z7C7 330 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 CLEC14AQ86T13 490 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 GSTCDQ8NEC7 633 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 ZSCAN18Q8TBC5 510 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 DPF3Q92784 378 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 ZNF669Q96BR6 464 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 MFSD3Q96ES6 412 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 MED10Q9BTT4 135 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 MLPHQ9BV36 600 aaPredicted RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 DDX43Q9NXZ2 648 aaKnown RBP16.24■□□□□ 0.19
HOXD3-202ENST00000410016 BFARQ9NZS9 450 aa16.24■□□□□ 0.19
HOXD3-202ENST00000410016 MEIS3P2A8K0S8 358 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 FBXO21O94952 628 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 LINGO3P0C6S8 592 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 MX2P20592 715 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 GARSP41250 739 aaKnown RBP16.23■□□□□ 0.19
HOXD3-202ENST00000410016 CDK7P50613 346 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 TPI1P60174 286 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 SLC25A3Q00325 362 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 VWA5B1Q5TIE3 1220 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 CTU1Q7Z7A3 348 aaKnown RBP16.23■□□□□ 0.19
HOXD3-202ENST00000410016 PPP4R1Q8TF05 950 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 MYBPHLA2RUH7 354 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 MEI4A8MW99 385 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 G3V2L1 256 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 UPP2O95045 317 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 MYL4P12829 197 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 ANPEPP15144 967 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 PSEN2P49810 448 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 ZBTB17Q13105 803 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 FAM110CQ1W6H9 321 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 HSP90AA5PQ58FG0 334 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 CERCAMQ5T4B2 595 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 NAPRTQ6XQN6 538 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 BHLHA9Q7RTU4 235 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 TLK2Q86UE8 772 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 HDAC11Q96DB2 347 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 ATXN7L3BQ96GX2 97 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 PCED1BQ96HM7 432 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 SENP8Q96LD8 212 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 PTPN18Q99952 460 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 SYT15Q9BQS2 421 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 COLEC11Q9BWP8 271 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 GBA3Q9H227 469 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 TSPYL2Q9H2G4 693 aaPredicted RBP16.23■□□□□ 0.19
HOXD3-202ENST00000410016 CNGB3Q9NQW8 809 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 PCDHB12Q9Y5F1 795 aa16.23■□□□□ 0.19
HOXD3-202ENST00000410016 CENPFP49454 3210 aa16.22■□□□□ 0.19
HOXD3-202ENST00000410016 ERI2A8K979 691 aaKnown RBP16.22■□□□□ 0.19
HOXD3-202ENST00000410016 ZNF189O75820 626 aaPredicted RBP16.22■□□□□ 0.19
HOXD3-202ENST00000410016 CIB2O75838 187 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms