RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
IMP4-202ENST00000409649 SAR1BQ9Y6B6 198 aa17.1■□□□□ 0.33
IMP4-202ENST00000409649 NARSO43776 548 aaKnown RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 CST8O60676 142 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 CTHP32929 405 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 GRIA2P42262 883 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 PLK1P53350 603 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 GNA12Q03113 381 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 SULT2A1Q06520 285 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 POLD3Q15054 466 aaPredicted RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 MLF2Q15773 248 aaPredicted RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 SYT10Q6XYQ8 523 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 ANKS1BQ7Z6G8 1248 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 CIR1Q86X95 450 aaPredicted RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 NAT16Q8N8M0 369 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 OSBPL9Q96SU4 736 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 P2RY13Q9BPV8 354 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 C2orf49Q9BVC5 232 aaPredicted RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 FRMD8P1Q9BZ68 369 aaPredicted RBP17.09■□□□□ 0.33
IMP4-202ENST00000409649 BRD8Q9H0E9 1235 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 MUC3BQ9H195 1237 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 RNF14Q9UBS8 474 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 ZNF212Q9UDV6 495 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 FBXL21Q9UKT6 434 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 HPCAL4Q9UM19 191 aa17.09■□□□□ 0.33
IMP4-202ENST00000409649 ARHGAP42A6NI28 874 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 APODP05090 189 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 PABPC1P11940 636 aaKnown RBP17.08■□□□□ 0.32
IMP4-202ENST00000409649 DRD1P21728 446 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 IRAK1P51617 712 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 GEMIN4P57678 1058 aaKnown RBP17.08■□□□□ 0.32
IMP4-202ENST00000409649 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
IMP4-202ENST00000409649 GAB4Q2WGN9 574 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 KAZNQ674X7 775 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 CXorf57Q6NSI4 855 aaKnown RBP17.08■□□□□ 0.32
IMP4-202ENST00000409649 ZNF852Q6ZMS4 543 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 PQLC3Q8N755 202 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 TTC8Q8TAM2 541 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 UCMAQ8WVF2 138 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 P3H4Q92791 437 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 ACDQ96AP0 544 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 NELL2Q99435 816 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 ARHGEF3Q9NR81 526 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 ABCB8Q9NUT2 735 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 GGA2Q9UJY4 613 aa17.08■□□□□ 0.32
IMP4-202ENST00000409649 TTC7AQ9ULT0 858 aaPredicted RBP17.08■□□□□ 0.32
IMP4-202ENST00000409649 EYSQ5T1H1 3165 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 A0A0A0MRY4 1105 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 ESPNB1AK53 854 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 APOC4-APOC2K7ER74 178 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 ZNF500O60304 480 aaPredicted RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 CEP104O60308 925 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 APOC2P02655 101 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 ASLP04424 464 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 ATP5BP06576 529 aaKnown RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 CISD3P0C7P0 127 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 KRT10P13645 584 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 HLA-FP30511 346 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 OPRD1P41143 372 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 ZNF33AQ06730 810 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 LMAN2Q12907 356 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 ZNF211Q13398 564 aaPredicted RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 TUBB2AQ13885 445 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 DCAF12L1Q5VU92 463 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 RNF219Q5W0B1 726 aaPredicted RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 AFMIDQ63HM1 303 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 NCBP2-AS2Q69YL0 99 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 KIAA0907Q7Z7F0 614 aaPredicted RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 METTL3Q86U44 580 aaKnown RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 SLC13A5Q86YT5 568 aaPredicted RBP17.07■□□□□ 0.32
IMP4-202ENST00000409649 PLD5Q8N7P1 536 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 TERB1Q8NA31 727 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 DCAF4L2Q8NA75 395 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 KIF18AQ8NI77 898 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 KCNV2Q8TDN2 545 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 PSMB7Q99436 277 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 FEM1AQ9BSK4 669 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 TUBB2BQ9BVA1 445 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 HEMGNQ9BXL5 484 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 HOMER3Q9NSC5 361 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 VPS28Q9UK41 221 aa17.07■□□□□ 0.32
IMP4-202ENST00000409649 TBC1D3BA6NDS4 549 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 RASA4BC9J798 803 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 PPP1R12AO14974 1030 aaPredicted RBP17.06■□□□□ 0.32
IMP4-202ENST00000409649 NPC1O15118 1278 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 RASA4O43374 803 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 KAT7O95251 611 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 POLR2EP19388 210 aaKnown RBP17.06■□□□□ 0.32
IMP4-202ENST00000409649 TNFRSF4P43489 277 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 SLC20A2Q08357 652 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 PDK1Q15118 436 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 PLEKHG6Q3KR16 790 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 FBXO43Q4G163 708 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 FSCBQ5H9T9 825 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 IL31Q6EBC2 164 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 RETSATQ6NUM9 610 aa17.06■□□□□ 0.32
IMP4-202ENST00000409649 TPRG1Q6ZUI0 275 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms