RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 PPP1R10Q96QC0 940 aaKnown RBP11.66□□□□□ -0.54
SNX13-202ENST00000409604 PITPNM3Q9BZ71 974 aa11.66□□□□□ -0.54
SNX13-202ENST00000409604 TIAM2Q8IVF5 1701 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 CFLARO15519 480 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 PLK1P53350 603 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 CACNA2D1P54289 1103 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 COPS2P61201 443 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 KLC3Q6P597 504 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 LDB1Q86U70 411 aaPredicted RBP11.65□□□□□ -0.54
SNX13-202ENST00000409604 LRRC6Q86X45 466 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 SH3RF2Q8TEC5 729 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 PKNOX2Q96KN3 472 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 RAD9AQ99638 391 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 TLR9Q9NR96 1032 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 DNAJC16Q9Y2G8 782 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 MYO18AQ92614 2054 aaKnown RBP11.65□□□□□ -0.54
SNX13-202ENST00000409604 SDR42E2A6NKP2 422 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 INPPL1O15357 1258 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 DIAPH2O60879 1101 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 PPFIA2O75334 1257 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 RHOBTB1O94844 696 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 PARNO95453 639 aaKnown RBP11.65□□□□□ -0.54
SNX13-202ENST00000409604 TIMP1P01033 207 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 GRM2Q14416 872 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 TMTC4Q5T4D3 741 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 MFSD5Q6N075 450 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 FOXR2Q6PJQ5 311 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 RAB44Q7Z6P3 723 aaPredicted RBP11.65□□□□□ -0.54
SNX13-202ENST00000409604 WDTC1Q8N5D0 677 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 ARMC2Q8NEN0 867 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 ZNF461Q8TAF7 563 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 NAT14Q8WUY8 206 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 SUSD6Q92537 303 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 UBXN6Q9BZV1 441 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 MFSD1Q9H3U5 465 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 ACSS2Q9NR19 701 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 HCFC1R1Q9NWW0 138 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 FAM50BQ9Y247 325 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 COL24A1Q17RW2 1714 aa11.65□□□□□ -0.54
SNX13-202ENST00000409604 EP300Q09472 2414 aaPredicted RBP11.65□□□□□ -0.54
SNX13-202ENST00000409604 E9PAM4 449 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 DAB1O75553 588 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 KCNA5P22460 613 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 HDAC4P56524 1084 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 OVGP1Q12889 678 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 NUMA1Q14980 2115 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 STRA8Q7Z7C7 330 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 RTN4RL1Q86UN2 441 aaPredicted RBP11.65□□□□□ -0.55
SNX13-202ENST00000409604 CRYBG2Q8N1P7 616 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 PLD5Q8N7P1 536 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 HIPK4Q8NE63 616 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 KLHDC9Q8NEP7 349 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 SLC35F5Q8WV83 523 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 PSMG2Q969U7 264 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 MCUR1Q96AQ8 359 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 STRA6Q9BX79 667 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 FAM96AQ9H5X1 160 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 NMUR1Q9HB89 426 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 IL23AQ9NPF7 189 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 EVLQ9UI08 416 aaPredicted RBP11.65□□□□□ -0.55
SNX13-202ENST00000409604 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 PHF24Q9UPV7 400 aa11.65□□□□□ -0.55
SNX13-202ENST00000409604 FCF1Q9Y324 198 aaKnown RBP11.65□□□□□ -0.55
SNX13-202ENST00000409604 RIF1Q5UIP0 2472 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 MAP3K13O43283 966 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 LIASO43766 372 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 CNPP09543 421 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 USP46P62068 366 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 DDX39BQ13838 428 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 ASTE1Q2TB18 679 aaPredicted RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 TSEN2Q8NCE0 465 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 PCDH19Q8TAB3 1148 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 KBTBD7Q8WVZ9 684 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 ULK4Q96C45 1275 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 ZNF623O75123 536 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 UGT2B4P06133 528 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 NFKBIAP25963 317 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 GEMP55040 296 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 TEAD2Q15562 447 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 ZSCAN26Q16670 478 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 ATXN7L2Q5T6C5 722 aaPredicted RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 TTC27Q6P3X3 843 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 KLK6Q92876 244 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 XPO6Q96QU8 1125 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 PRMT1Q99873 361 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 BCO2Q9BYV7 579 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 GPR88Q9GZN0 384 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 MIR1-1HGQ9H1L0 117 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 ARHGEF4Q9NR80 690 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 CIDEBQ9UHD4 219 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 C2orf78A6NCI8 922 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 C2orf81A6NN90 581 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 PRLRP16471 622 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 GDF10P55107 478 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 WDR5P61964 334 aaKnown RBP11.64□□□□□ -0.55
SNX13-202ENST00000409604 BCL2L1Q07817 233 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 ZNF470Q6ECI4 717 aa11.64□□□□□ -0.55
SNX13-202ENST00000409604 FBXL19Q6PCT2 694 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms