RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 ARHGAP12Q8IWW6 846 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 DNAAF3Q8N9W5 541 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 LRRC8CQ8TDW0 803 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 USP33Q8TEY7 942 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 ARNTL2Q8WYA1 636 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 PITPNM3Q9BZ71 974 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 USP15Q9Y4E8 981 aaPredicted RBP21.19■□□□□ 0.98
USP39-203ENST00000409470 MRPL42Q9Y6G3 142 aaKnown RBP21.19■□□□□ 0.98
USP39-203ENST00000409470 ERI2A8K979 691 aaKnown RBP21.19■□□□□ 0.98
USP39-203ENST00000409470 SUN1O94901 812 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 CXCL10P02778 98 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 CCNCP24863 283 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 SMARCB1Q12824 385 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 TAF10Q12962 218 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 PRPSAP1Q14558 356 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 ARHGAP36Q6ZRI8 547 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 FAM47EQ6ZV65 393 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 C14orf80Q86SX3 495 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 CDKL2Q92772 493 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 SLC39A13Q96H72 371 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 APOPT1Q96IL0 206 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 CRISPLD1Q9H336 500 aa21.19■□□□□ 0.98
USP39-203ENST00000409470 TLR8Q9NR97 1041 aaKnown RBP21.19■□□□□ 0.98
USP39-203ENST00000409470 TBC1D4O60343 1298 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 PARNO95453 639 aaKnown RBP21.18■□□□□ 0.98
USP39-203ENST00000409470 ADRA1DP25100 572 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 MLLT6P55198 1093 aaPredicted RBP21.18■□□□□ 0.98
USP39-203ENST00000409470 SLC18A2Q05940 514 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 DUSP4Q13115 394 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 DNAJC3Q13217 504 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 CRYMQ14894 314 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 PRSS55Q6UWB4 352 aaPredicted RBP21.18■□□□□ 0.98
USP39-203ENST00000409470 SLC39A5Q6ZMH5 540 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 ANKRD33Q7Z3H0 272 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 SPATA21Q7Z572 469 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 UNC5BQ8IZJ1 945 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 BCL7CQ8WUZ0 217 aaPredicted RBP21.18■□□□□ 0.98
USP39-203ENST00000409470 TTC17Q96AE7 1141 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 OXNAD1Q96HP4 312 aaPredicted RBP21.18■□□□□ 0.98
USP39-203ENST00000409470 C1orf74Q96LT6 269 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 TSGA13Q96PP4 275 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 MLPHQ9BV36 600 aaPredicted RBP21.18■□□□□ 0.98
USP39-203ENST00000409470 SLC39A8Q9C0K1 460 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 MPP6Q9NZW5 540 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 SLC17A7Q9P2U7 560 aa21.18■□□□□ 0.98
USP39-203ENST00000409470 FAM92AA1XBS5 289 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 ALDH1A2O94788 518 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 POLBP06746 335 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 HAPLN1P10915 354 aaPredicted RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 CCNB1P14635 433 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 SERPINB9P50453 376 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 NRG1Q02297 640 aaPredicted RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 BMPR2Q13873 1038 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 PIK3R6Q5UE93 754 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 C10orf67Q8IYJ2 551 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 RTL3Q8N8U3 475 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 MTBPQ96DY7 904 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 SPATA17Q96L03 361 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 OXCT2Q9BYC2 517 aaPredicted RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 C12orf65Q9H3J6 166 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 OLA1Q9NTK5 396 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 CLIC5Q9NZA1 410 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 BFARQ9NZS9 450 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 VANGL2Q9ULK5 521 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 CDY1Q9Y6F8 540 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 TBX18O95935 607 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 OAS1P00973 400 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 ALDH7A1P49419 539 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 PSEN1P49768 467 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 C10orf120Q5SQS8 335 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 KCTD11Q693B1 232 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 RGS9BPQ6ZS82 235 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 MIB1Q86YT6 1006 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.17■□□□□ 0.98
USP39-203ENST00000409470 C2orf15Q8WU43 125 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 SPOCK2Q92563 424 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 DPF3Q92784 378 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 GRAMD1AQ96CP6 724 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 IQCGQ9H095 443 aaKnown RBP21.17■□□□□ 0.98
USP39-203ENST00000409470 CASS4Q9NQ75 786 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 NDFIP2Q9NV92 336 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.17■□□□□ 0.98
USP39-203ENST00000409470 UBP1Q9NZI7 540 aa21.17■□□□□ 0.98
USP39-203ENST00000409470 TANC1Q9C0D5 1861 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 WDR91A4D1P6 747 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 CCT8L1PA6NM43 557 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 COPEO14579 308 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 VNN2O95498 520 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 RPL10AP62906 217 aaKnown RBP21.16■□□□□ 0.98
USP39-203ENST00000409470 TLE2Q04725 743 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 TRIM60Q495X7 471 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 MROH9Q5TGP6 573 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.16■□□□□ 0.98
USP39-203ENST00000409470 SH2D5Q6ZV89 423 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 ATP6V0D2Q8N8Y2 350 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 ZSCAN18Q8TBC5 510 aaPredicted RBP21.16■□□□□ 0.98
USP39-203ENST00000409470 GIPC2Q8TF65 315 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 LRRC40Q9H9A6 602 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 RPS6KL1Q9Y6S9 549 aa21.16■□□□□ 0.98
USP39-203ENST00000409470 MAFKO60675 156 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms