RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 DPF3Q92784 378 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 ARMC5Q96C12 935 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 TMEM169Q96HH4 297 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SGSM3Q96HU1 749 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 ZNF317Q96PQ6 595 aaPredicted RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 KIF9Q9HAQ2 790 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SSU72Q9NP77 194 aaKnown RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 MPP6Q9NZW5 540 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 AFF4Q9UHB7 1163 aaKnown RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 VANGL2Q9ULK5 521 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 SUN1O94901 812 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 TIMP1P01033 207 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 C1QAP02745 245 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 NFKB1P19838 968 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 MGAT1P26572 445 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 KPNA1P52294 538 aaPredicted RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 SPARCL1Q14515 664 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 ACBD5Q5T8D3 534 aaPredicted RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 NUGGCQ68CJ6 796 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 FAM117BQ6P1L5 589 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 LRRC49Q8IUZ0 686 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 PPM1NQ8N819 430 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 CDK5RAP1Q96SZ6 601 aaKnown RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 GORASP1Q9BQQ3 440 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 NAT9Q9BTE0 207 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 DONSONQ9NYP3 566 aa19.41■□□□□ 0.7
USP39-202ENST00000409025 PPARGC1AQ9UBK2 798 aaKnown RBP19.41■□□□□ 0.7
USP39-202ENST00000409025 TLR5O60602 858 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 EFCAB14O75071 495 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 CCNB1P14635 433 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 DRD4P21917 467 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 RING1Q06587 406 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 AFMIDQ63HM1 303 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 STEAP4Q687X5 459 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 TIGD7Q6NT04 549 aaPredicted RBP19.4■□□□□ 0.7
USP39-202ENST00000409025 ARHGAP36Q6ZRI8 547 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 SLC39A11Q8N1S5 342 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 ZSCAN18Q8TBC5 510 aaPredicted RBP19.4■□□□□ 0.7
USP39-202ENST00000409025 MZB1Q8WU39 189 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 CLSTN3Q9BQT9 956 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 ZYG11BQ9C0D3 744 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 CCSER2Q9H7U1 834 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 MLXIPLQ9NP71 852 aa19.4■□□□□ 0.7
USP39-202ENST00000409025 PRDM5Q9NQX1 630 aaPredicted RBP19.4■□□□□ 0.7
USP39-202ENST00000409025 PSMD3O43242 534 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 MAFKO60675 156 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 IGLV3-27P01718 113 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 HMBSP08397 361 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 RHOQP17081 205 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 PGAM1P18669 254 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 KRT4P19013 534 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 DEFB103AP81534 67 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 DSG1Q02413 1049 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 MTA1Q13330 715 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 BTG3Q14201 252 aaPredicted RBP19.39■□□□□ 0.7
USP39-202ENST00000409025 CYS1Q717R9 158 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 ZNF683Q8IZ20 524 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 PDZD8Q8NEN9 1154 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 ZNF461Q8TAF7 563 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 GDAP1Q8TB36 358 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 USP33Q8TEY7 942 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 CKAP2Q8WWK9 683 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 HERC2P3Q9BVR0 1158 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 NDFIP2Q9NV92 336 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 HSFX1Q9UBD0 423 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 ZNF180Q9UJW8 692 aa19.39■□□□□ 0.7
USP39-202ENST00000409025 CARNS1A5YM72 827 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 FAM159BA6NKW6 160 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 MATN3O15232 486 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 MT-ND3P03897 115 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 CSF2RAP15509 400 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 LAG3P18627 525 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 LGSNQ5TDP6 509 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 TTC39BQ5VTQ0 682 aaPredicted RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 TPGS2Q68CL5 300 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 KCTD11Q693B1 232 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 TMCO2Q7Z6W1 182 aaPredicted RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 CMTR2Q8IYT2 770 aaKnown RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 ZNF276Q8N554 614 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 OR52K1Q8NGK4 314 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 OVCA2Q8WZ82 227 aa19.39■□□□□ 0.69
USP39-202ENST00000409025 ALKBH8Q96BT7 664 aaKnown RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 TRIM56Q9BRZ2 755 aaKnown RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 MLPHQ9BV36 600 aaPredicted RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 RC3H2Q9HBD1 1191 aaKnown RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 PIH1D1Q9NWS0 290 aaKnown RBP19.39■□□□□ 0.69
USP39-202ENST00000409025 CXorf49A8MYA2 514 aaPredicted RBP19.38■□□□□ 0.69
USP39-202ENST00000409025 ABLIM3O94929 683 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 VIMP08670 466 aaKnown RBP19.38■□□□□ 0.69
USP39-202ENST00000409025 CA4P22748 312 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 PAPOLAP51003 745 aaKnown RBP19.38■□□□□ 0.69
USP39-202ENST00000409025 NDST2P52849 883 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 WDR5P61964 334 aaKnown RBP19.38■□□□□ 0.69
USP39-202ENST00000409025 CRADDP78560 199 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 IL9RQ01113 521 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 LRRC34Q8IZ02 419 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 UMODL1-AS1Q8N2C9 162 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 ARNTL2Q8WYA1 636 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 IL12RB2Q99665 862 aa19.38■□□□□ 0.69
USP39-202ENST00000409025 LRRC40Q9H9A6 602 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms