RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 GFPT2O94808 682 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 PNMA6AP0CW24 399 aaPredicted RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 C5AR1P21730 350 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 CD27P26842 260 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 PMLP29590 882 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 SDC4P31431 198 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 NUDT1P36639 197 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ETFBP38117 255 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 NSFP46459 744 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 GRIA4P48058 902 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 COPB1P53618 953 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 RNASE9P60153 205 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 POLR2FP61218 127 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 NOMO3P69849 1222 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 GRIK2Q13002 908 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 SUZ12Q15022 739 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 CST6Q15828 149 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 C5orf22Q49AR2 442 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC45A4Q5BKX6 768 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 C6orf118Q5T5N4 469 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 FBXL22Q6P050 247 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF783Q6ZMS7 281 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ADAT2Q7Z6V5 191 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 SETD3Q86TU7 594 aaPredicted RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 NOP9Q86U38 636 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 DHX40Q8IX18 779 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 GPT2Q8TD30 523 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 OR8D1Q8WZ84 308 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 NT5C3BQ969T7 300 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 MRGPRX3Q96LB0 322 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 C1orf74Q96LT6 269 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 TKTL2Q9H0I9 626 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 GANQ9H2C0 597 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 CD93Q9NPY3 652 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 PIGVQ9NUD9 493 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 FANCLQ9NW38 375 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 FBXL12Q9NXK8 326 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ARHGEF38Q9NXL2 777 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 LIMA1Q9UHB6 759 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 EIF2B4Q9UI10 523 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 INTS6Q9UL03 887 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 PCDHB9Q9Y5E1 797 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 HS3ST4Q9Y661 456 aa9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 TPRP12270 2363 aaKnown RBP9.35□□□□□ -0.91
SNORD88A-201ENST00000408314 ACACBO00763 2458 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 CXorf51AA0A1B0GTR3 108 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 SMTNL1A8MU46 457 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 GOLGA8SH3BPF8 625 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 SLC7A4O43246 635 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 DFNA5O60443 496 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 RNASEH2AO75792 299 aaKnown RBP9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 FSBPO95073 299 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 CYP1A1P04798 512 aaPredicted RBP9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 CALB1P05937 261 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 RHOCP08134 193 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 MMEP08473 750 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 GOT1P17174 413 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 MMP8P22894 467 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 ACSL1P33121 698 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 CLCN6P51797 869 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 JAM2P57087 298 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 PITX1P78337 314 aaPredicted RBP9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 CENPCQ03188 943 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 UBXN1Q04323 297 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 ZNF423Q2M1K9 1284 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 FILIP1LQ4L180 1135 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 FSCBQ5H9T9 825 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 C9orf64Q5T6V5 341 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 NAA35Q5VZE5 725 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 KIAA0895LQ68EN5 471 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 CXorf57Q6NSI4 855 aaKnown RBP9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 RETSATQ6NUM9 610 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 DPY19L2P1Q6NXN4 242 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 MMAAQ8IVH4 418 aaKnown RBP9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 DCAF4L2Q8NA75 395 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 DEFB124Q8NES8 71 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 OR2T34Q8NGX1 318 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 MYO19Q96H55 970 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 ERGIC2Q96RQ1 377 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 HAPLN3Q96S86 360 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 TBCBQ99426 244 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 SIK2Q9H0K1 926 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 NLRC4Q9NPP4 1024 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 ADAMTS1Q9UHI8 967 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 NOCTQ9UK39 431 aaKnown RBP9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 TBC1D30Q9Y2I9 924 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 PCDHGB2Q9Y5G2 931 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 DNAH14Q0VDD8 3507 aa9.34□□□□□ -0.91
SNORD88A-201ENST00000408314 PCDH15Q96QU1 1955 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 A0A1W2PP55 124 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 LRRC10BA6NIK2 292 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 TTC34A8MYJ7 566 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 MID1O15344 667 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 YKT6O15498 198 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 FLRT2O43155 660 aa9.33□□□□□ -0.92
SNORD88A-201ENST00000408314 ATP9BO43861 1147 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms