RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 RIF1Q5UIP0 2472 aaKnown RBP16.34■□□□□ 0.21
GDPD3-202ENST00000406256 NUMA1Q14980 2115 aa16.33■□□□□ 0.21
GDPD3-202ENST00000406256 ZFHX2Q9C0A1 2572 aaPredicted RBP16.33■□□□□ 0.2
GDPD3-202ENST00000406256 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 LILRB5O75023 590 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 PROSCO94903 275 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 PRKCHP24723 683 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 EFHC2Q5JST6 749 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 ERMARDQ5T6L9 678 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 RASSF3Q86WH2 238 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 RFFLQ8WZ73 363 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 FEM1AQ9BSK4 669 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
GDPD3-202ENST00000406256 TMEM248Q9NWD8 314 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 RAD54BQ9Y620 910 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 STON1Q9Y6Q2 735 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 LAMA1P25391 3075 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 PIEZO1Q92508 2521 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 ZNF292O60281 2723 aa16.33■□□□□ 0.2
GDPD3-202ENST00000406256 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
GDPD3-202ENST00000406256 A0A0D9SEW6 157 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 TIMM44O43615 452 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 RNF8O76064 485 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 DLDP09622 509 aaKnown RBP16.32■□□□□ 0.2
GDPD3-202ENST00000406256 HOXB2P14652 356 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 RHOQP17081 205 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 MAGEA1P43355 309 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 PXNP49023 591 aaPredicted RBP16.32■□□□□ 0.2
GDPD3-202ENST00000406256 TAS2R40P59535 323 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
GDPD3-202ENST00000406256 SLC12A1Q13621 1099 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 EOGTQ5NDL2 527 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 LRRC31Q6UY01 552 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 SETD3Q86TU7 594 aaPredicted RBP16.32■□□□□ 0.2
GDPD3-202ENST00000406256 CHPFQ8IZ52 775 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 ACRBPQ8NEB7 543 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 TBC1D31Q96DN5 1066 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 PHOX2BQ99453 314 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 BAG1Q99933 345 aaPredicted RBP16.32■□□□□ 0.2
GDPD3-202ENST00000406256 FAM86C1Q9NVL1 165 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 SALL4Q9UJQ4 1053 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 PCDHA13Q9Y5I0 950 aa16.32■□□□□ 0.2
GDPD3-202ENST00000406256 TNRC6BQ9UPQ9 1833 aaKnown RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 WASH4PA8MWX3 477 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 MYO1FO00160 1098 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 NPC1O15118 1278 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 PRPSAP2O60256 369 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 RARAP10276 462 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 C7P10643 843 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 HLA-EP13747 358 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 POLR2EP19388 210 aaKnown RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 FNTBP49356 437 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 ARSEP51690 589 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 HADHBP55084 474 aaKnown RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 NHLH1Q02575 133 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 DPYSL2Q16555 572 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 SMTNL2Q2TAL5 461 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 KCNT1Q5JUK3 1230 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 RNF219Q5W0B1 726 aaPredicted RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 TRMT11Q7Z4G4 463 aaKnown RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 PSTKQ8IV42 348 aaKnown RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 CAMKK1Q8N5S9 505 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 ZNF366Q8N895 744 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 MDGA1Q8NFP4 955 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 OR7D4Q8NG98 312 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 FAM71BQ8TC56 605 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 KLC2Q9H0B6 622 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 EBF1Q9UH73 591 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 SLC8A2Q9UPR5 921 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 ERVW-1Q9UQF0 538 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 EP300Q09472 2414 aaPredicted RBP16.31■□□□□ 0.2
GDPD3-202ENST00000406256 GON4LQ3T8J9 2241 aa16.31■□□□□ 0.2
GDPD3-202ENST00000406256 A0A0U1RQJ8 604 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 ILVBLA1L0T0 632 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 CREB3O43889 395 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 SNAP91O60641 907 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 ZMPSTE24O75844 475 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 RHOCP08134 193 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 GABRG2P18507 467 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 MAN1A1P33908 653 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 STK19P49842 368 aaPredicted RBP16.3■□□□□ 0.2
GDPD3-202ENST00000406256 DGKEP52429 567 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 WDR5BQ86VZ2 330 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 RHOT2Q8IXI1 618 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 RTL3Q8N8U3 475 aaKnown RBP16.3■□□□□ 0.2
GDPD3-202ENST00000406256 UCMAQ8WVF2 138 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 TEKT4Q8WW24 435 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 ATRIPQ8WXE1 791 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 TSC1Q92574 1164 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 ERLEC1Q96DZ1 483 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 NCAPGQ9BPX3 1015 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 FAM126AQ9BYI3 521 aaPredicted RBP16.3■□□□□ 0.2
GDPD3-202ENST00000406256 MTG2Q9H4K7 406 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 DHX35Q9H5Z1 703 aaKnown RBP16.3■□□□□ 0.2
GDPD3-202ENST00000406256 ZSCAN32Q9NX65 697 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 SLCO3A1Q9UIG8 710 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 R4GN57 208 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 SHROOM3Q8TF72 1996 aa16.3■□□□□ 0.2
GDPD3-202ENST00000406256 FAM186AA6NE01 2351 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms