RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 MUC3BQ9H195 1237 aa18.69■□□□□ 0.58
PTPRN2-204ENST00000404321 ITM2CQ9NQX7 267 aa18.69■□□□□ 0.58
PTPRN2-204ENST00000404321 TMEM74BQ9NUR3 256 aa18.69■□□□□ 0.58
PTPRN2-204ENST00000404321 AIPL1Q9NZN9 384 aa18.69■□□□□ 0.58
PTPRN2-204ENST00000404321 SUN2Q9UH99 717 aa18.69■□□□□ 0.58
PTPRN2-204ENST00000404321 VPS28Q9UK41 221 aa18.69■□□□□ 0.58
PTPRN2-204ENST00000404321 TCRBV5S1A1TA0A578 114 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 ENDOD1O94919 500 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 PBX1P40424 430 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 PTPN9P43378 593 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 HDAC4P56524 1084 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 GSCP56915 257 aaPredicted RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 RPS14P62263 151 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 RPL7AP62424 266 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 ZNF33AQ06730 810 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 SLC12A1Q13621 1099 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 C5orf22Q49AR2 442 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 SLC41A1Q8IVJ1 513 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 ALG14Q96F25 216 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 C1orf74Q96LT6 269 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 HAPLN3Q96S86 360 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 FEM1AQ9BSK4 669 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 MUC22E2RYF6 1773 aaPredicted RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 SIGLEC16A6NMB1 481 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 DRGXA6NNA5 263 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 CCP110O43303 1012 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 RHOCP08134 193 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 SRPRAP08240 638 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 VAV1P15498 845 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 ADRA1BP35368 520 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 OXCT1P55809 520 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 HNRNPA1L2Q32P51 320 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 C9orf64Q5T6V5 341 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 METTL3Q86U44 580 aaKnown RBP18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 CCDC185Q8N715 623 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 RNF214Q8ND24 703 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 GPR174Q9BXC1 333 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 EDEM3Q9BZQ6 932 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 DLL3Q9NYJ7 618 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 TBC1D30Q9Y2I9 924 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 OR51B4Q9Y5P0 310 aa18.68■□□□□ 0.58
PTPRN2-204ENST00000404321 SPAG17Q6Q759 2223 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 DDX3XO00571 662 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■■■■□ 24
PTPRN2-204ENST00000404321 KHNYNO15037 678 aaKnown RBP18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 OR1E1P30953 314 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 PRKCIP41743 596 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 PLK1P53350 603 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 ARL13BQ3SXY8 428 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 FIGNQ5HY92 759 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 PPP1R15BQ5SWA1 713 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 ARTNQ5T4W7 220 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 SCYL2Q6P3W7 929 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 DCUN1D2Q6PH85 259 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 STRADAQ7RTN6 431 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 SYT12Q8IV01 421 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 NETO1Q8TDF5 533 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 GANCQ8TET4 914 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 CENPIQ92674 756 aaPredicted RBP18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 NUP58Q9BVL2 599 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 XPO4Q9C0E2 1151 aaKnown RBP18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 TSPY26PQ9H489 355 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 FSCN3Q9NQT6 498 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 TMEM51Q9NW97 253 aa18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 WSB2Q9NYS7 404 aaPredicted RBP18.67■□□□□ 0.58
PTPRN2-204ENST00000404321 IGLV3-10A0A075B6K4 115 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 ANKRD62A6NC57 917 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 FAM72CH0Y354 149 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 FOXD2O60548 495 aaPredicted RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 SNAP91O60641 907 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 FTLP02792 175 aaPredicted RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 DNTTP04053 509 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 CFIP05156 583 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 MAOBP27338 520 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 ZNF143P52747 638 aaPredicted RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 IRX4P78413 519 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 OGDHQ02218 1023 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 SULT2A1Q06520 285 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 PUM1Q14671 1186 aaKnown RBP eCLIP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 ACCSLQ4AC99 568 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 TDRD12Q587J7 1177 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 TRIM61Q5EBN2 209 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 SPDYCQ5MJ68 293 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 FAM72AQ5TYM5 149 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 ZNF776Q68DI1 518 aaPredicted RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 FAM72DQ6L9T8 149 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 RWDD4Q6NW29 188 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 FAM72BQ86X60 149 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 MMAAQ8IVH4 418 aaKnown RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 DRC7Q8IY82 874 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 RGL4Q8IZJ4 473 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 STK40Q8N2I9 435 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 KDM1BQ8NB78 822 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 EDEM2Q9BV94 578 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 ZYG11BQ9C0D3 744 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 RSPH9Q9H1X1 276 aaPredicted RBP18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 OR12D3Q9UGF7 316 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 PILRBQ9UKJ0 227 aa18.66■□□□□ 0.58
PTPRN2-204ENST00000404321 A0A0D9SEW6 157 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 EDDM13A0A1B0GTR0 161 aa18.65■□□□□ 0.58
PTPRN2-204ENST00000404321 LNP1A1A4G5 178 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms