RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 GRIK3Q13003 919 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 KCNA10Q16322 511 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 ITPRIPL1Q6GPH6 555 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 OVOS1Q6IE37 1185 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 ALYREFQ86V81 257 aaKnown RBP17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 ZSCAN18Q8TBC5 510 aaPredicted RBP17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 DPF3Q92784 378 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 ATP2A3Q93084 1043 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 TEKT5Q96M29 485 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 VAT1Q99536 393 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 CPNE1Q99829 537 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 SHROOM3Q8TF72 1996 aa17.34■□□□□ 0.37
DNMT3A-205ENST00000402667 PLIN3O60664 434 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 CCDC22O60826 627 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 JCHAINP01591 159 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 KITP10721 976 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 FCGRTP55899 365 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 KRT72Q14CN4 511 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 DBN1Q16643 649 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 PPM1JQ5JR12 505 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 CERCAMQ5T4B2 595 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 GRTP1Q5TC63 336 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 MIPEPQ99797 713 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 NMUR2Q9GZQ4 415 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 OSBPL2Q9H1P3 480 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 EBF2Q9HAK2 575 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 THAP1Q9NVV9 213 aa17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 MARCOQ9UEW3 520 aaPredicted RBP17.33■□□□□ 0.37
DNMT3A-205ENST00000402667 CEP350Q5VT06 3117 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 TDRD15B5MCY1 1934 aaKnown RBP17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 ZCWPW2A0A1B0GU75 182 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 ARHGAP42A6NI28 874 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 USP1O94782 785 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 IGLV3-25P01717 112 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 SRGAP2BP0DMP2 458 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 YY1P25490 414 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 TYK2P29597 1187 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 EIF4EBP2Q13542 120 aaPredicted RBP17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 ANKRD20A4Q4UJ75 823 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 APOL2Q9BQE5 337 aa17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 COL4A4P53420 1690 aaPredicted RBP17.33■□□□□ 0.36
DNMT3A-205ENST00000402667 F8W810 466 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 ATP9BO43861 1147 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 ANP32DO95626 131 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 PRKCGP05129 697 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 RPL10AP62906 217 aaKnown RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 CDK18Q07002 472 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 CACNB2Q08289 660 aaPredicted RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 ACCSLQ4AC99 568 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 FAM91A1Q658Y4 838 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 MBLAC2Q68D91 279 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 RWDD4Q6NW29 188 aaKnown RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 BEND5Q7L4P6 421 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 THEM5Q8N1Q8 247 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 PPP1R14CQ8TAE6 165 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 MFSD3Q96ES6 412 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 BTBD10Q9BSF8 475 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 CADM1Q9BY67 442 aaKnown RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 SIK2Q9H0K1 926 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 ARMCX1Q9P291 453 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 HBS1LQ9Y450 684 aaKnown RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 FAM155AB1AL88 458 aaPredicted RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 FGF3P11487 239 aaPredicted RBP17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 KCNA4P22459 653 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 CALB2P22676 271 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 AQP5P55064 265 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 INSCQ1MX18 579 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 AGAP2Q99490 1192 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 RBBP8Q99708 897 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 ARHGEF38Q9NXL2 777 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 UBP1Q9NZI7 540 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 NEU3Q9UQ49 428 aa17.32■□□□□ 0.36
DNMT3A-205ENST00000402667 TPH1P17752 444 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 NPY2RP49146 381 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 TSPY1Q01534 308 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 SREBF2Q12772 1141 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 FRG1Q14331 258 aaKnown RBP17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 MAPRE1Q15691 268 aaKnown RBP17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 TEDDM1Q5T9Z0 273 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 STRA8Q7Z7C7 330 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 DCLK2Q8N568 766 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 CNTD1Q8N815 330 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 KLHDC9Q8NEP7 349 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 SUSD3Q96L08 255 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 UROC1Q96N76 676 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 TRIM62Q9BVG3 475 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 WWP1Q9H0M0 922 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 TMEM216Q9P0N5 145 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 MAGEB16A2A368 324 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 IRAK2O43187 625 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 CA12O43570 354 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 ITM2AO43736 263 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 PROCP04070 461 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 ESRRAP11474 423 aaPredicted RBP17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 GM2AP17900 193 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 PAX3P23760 479 aa17.31■□□□□ 0.36
DNMT3A-205ENST00000402667 CYP2C18P33260 490 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms