RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 TLR8Q9NR97 1041 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 RRP15Q9Y3B9 282 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 BACE2Q9Y5Z0 518 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 IKBKGQ9Y6K9 419 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 WDR27A2RRH5 827 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TCP11X1B4DZS4 312 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 MAFKO60675 156 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 ZWINTO95229 277 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 OAS1P00973 400 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 VIMP08670 466 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 PGAM1P18669 254 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TAC1P20366 129 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 MGAT1P26572 445 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 TUBP50607 506 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 ARPP19P56211 112 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 DUSP4Q13115 394 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 IKBKEQ14164 716 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 SPARCL1Q14515 664 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 SLC1A5Q15758 541 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF449Q6P9G9 518 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 PRSS55Q6UWB4 352 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 DEFB128Q7Z7B8 93 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 PPM1NQ8N819 430 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 FBXO22Q8NEZ5 403 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 GPR152Q8TDT2 470 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 IL12RB2Q99665 862 aa12.56□□□□□ -0.4
CLIP4-203ENST00000401617 MLPHQ9BV36 600 aaPredicted RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 PPARGC1AQ9UBK2 798 aaKnown RBP12.56□□□□□ -0.4
CLIP4-203ENST00000401617 IGLV3-10A0A075B6K4 115 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 TM9SF1O15321 606 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 JCHAINP01591 159 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 MT-ND3P03897 115 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 SNRPAP09012 282 aaKnown RBP12.55□□□□□ -0.4
CLIP4-203ENST00000401617 CA4P22748 312 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 RING1Q06587 406 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
CLIP4-203ENST00000401617 USP41Q3LFD5 358 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 MGAT5BQ3V5L5 792 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 ARHGAP36Q6ZRI8 547 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 SERAC1Q96JX3 654 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 AGAP3Q96P47 875 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 SLC39A8Q9C0K1 460 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
CLIP4-203ENST00000401617 NDFIP2Q9NV92 336 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 GRID1Q9ULK0 1009 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 CHD5Q8TDI0 1954 aa12.55□□□□□ -0.4
CLIP4-203ENST00000401617 MATN3O15232 486 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ADAM12O43184 909 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 PSMD3O43242 534 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 SNX3O60493 162 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CSH1P0DML2 217 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CSH2P0DML3 217 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ATF6P18850 670 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 NFKB1P19838 968 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 RFC2P35250 354 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ALDH7A1P49419 539 aaKnown RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 NEK3P51956 506 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CORO7P57737 925 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 SESN2P58004 480 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 NIPAL4Q0D2K0 466 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 EFEMP1Q12805 493 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 PDK4Q16654 411 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ACBD5Q5T8D3 534 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 MARK2Q7KZI7 788 aaKnown RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CTAGE3PQ8IX95 158 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ATP6V0D2Q8N8Y2 350 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 FATE1Q969F0 183 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 IGSF21Q96ID5 467 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 BTN2A3PQ96KV6 586 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 SEPT5Q99719 369 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 UBE2OQ9C0C9 1292 aaKnown RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 NOL6Q9H6R4 1146 aaKnown RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 SYBUQ9NX95 663 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CDY1Q9Y6F8 540 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 HMX2A2RU54 273 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ARHGAP42A6NI28 874 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 SLC38A8A6NNN8 435 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 UGT1A9O60656 530 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 KRT37O76014 449 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 TBX18O95935 607 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CCNB1P14635 433 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 RHOQP17081 205 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 SERPINB9P50453 376 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CRADDP78560 199 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 NAB1Q13506 487 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ITIH4Q14624 930 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CRYMQ14894 314 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 MS4A13Q5J8X5 152 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 LGSNQ5TDP6 509 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 TAX1BP1Q86VP1 789 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ATPAF2Q8N5M1 289 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 CCDC197Q8NCU1 140 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 OR52K1Q8NGK4 314 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF689Q96CS4 500 aaPredicted RBP12.54□□□□□ -0.4
CLIP4-203ENST00000401617 MTBPQ96DY7 904 aa12.54□□□□□ -0.4
CLIP4-203ENST00000401617 ZNF419Q96HQ0 510 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms