RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 NUMA1Q14980 2115 aa16.34■□□□□ 0.21
ATG4B-203ENST00000400772 PCDH15Q96QU1 1955 aa16.33■□□□□ 0.21
ATG4B-203ENST00000400772 DRGXA6NNA5 263 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 TEX33O43247 280 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 MAPK8P45983 427 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 RAB6CQ53S08 254 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 ALFQ53S48 1182 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 DAB2IPQ5VWQ8 1189 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 ZNF776Q68DI1 518 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-203ENST00000400772 CAVIN1Q6NZI2 390 aaKnown RBP16.33■□□□□ 0.2
ATG4B-203ENST00000400772 RABEPKQ7Z6M1 372 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 EMC1Q8N766 993 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 C1orf216Q8TAB5 229 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 C1orf74Q96LT6 269 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 FAM129BQ96TA1 746 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 FEM1AQ9BSK4 669 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 FUCA2Q9BTY2 467 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 RAB6CQ9H0N0 254 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 C6orf106Q9H6K1 298 aaPredicted RBP16.33■□□□□ 0.2
ATG4B-203ENST00000400772 METTL5Q9NRN9 209 aaKnown RBP16.33■□□□□ 0.2
ATG4B-203ENST00000400772 TBC1D30Q9Y2I9 924 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 ADAMTS9Q9P2N4 1935 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 CNOT1A5YKK6 2376 aaKnown RBP16.33■□□□□ 0.2
ATG4B-203ENST00000400772 NCOR2Q9Y618 2525 aa16.33■□□□□ 0.2
ATG4B-203ENST00000400772 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 TARSL2A2RTX5 802 aaKnown RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 MEI4A8MW99 385 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 ARHGAP33O14559 1287 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 CLDN11O75508 207 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 ENDOD1O94919 500 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 GJB6O95452 261 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 DNTTP04053 509 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 CDH4P55283 916 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 GFPT1Q06210 699 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 SULT2A1Q06520 285 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 UAP1L1Q3KQV9 507 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 CCDC14Q49A88 953 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 N4BP2L1Q5TBK1 243 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 TRIM72Q6ZMU5 477 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 SND1Q7KZF4 910 aaKnown RBP eCLIP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 ASCC3Q8N3C0 2202 aaKnown RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 OR2I1PQ8NGU4 316 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 FRS2Q8WU20 508 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 C11orf70Q9BRQ4 267 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 NAT10Q9H0A0 1025 aaKnown RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 PABPC3Q9H361 631 aaKnown RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
ATG4B-203ENST00000400772 TMEM51Q9NW97 253 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 SERGEFQ9UGK8 458 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 SLCO1B1Q9Y6L6 691 aa16.32■□□□□ 0.2
ATG4B-203ENST00000400772 IGLV3-10A0A075B6K4 115 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 EDDM13A0A1B0GTR0 161 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 GIPC1O14908 333 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 VAV1P15498 845 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 KCNA4P22459 653 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 RDXP35241 583 aaKnown RBP16.31■□□□□ 0.2
ATG4B-203ENST00000400772 VASPP50552 380 aaPredicted RBP16.31■□□□□ 0.2
ATG4B-203ENST00000400772 OXCT1P55809 520 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 CLEC16AQ2KHT3 1053 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 SH3PXD2AQ5TCZ1 1133 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 MMAAQ8IVH4 418 aaKnown RBP16.31■□□□□ 0.2
ATG4B-203ENST00000400772 STK40Q8N2I9 435 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 JOSD2Q8TAC2 188 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 RXFP2Q8WXD0 754 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 GTPBP2Q9BX10 602 aaKnown RBP16.31■□□□□ 0.2
ATG4B-203ENST00000400772 BTBD1Q9H0C5 482 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 PCED1AQ9H1Q7 454 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 SUSD2Q9UGT4 822 aa16.31■□□□□ 0.2
ATG4B-203ENST00000400772 EIF2B4Q9UI10 523 aaKnown RBP16.31■□□□□ 0.2
ATG4B-203ENST00000400772 A0A1B0GTW7 788 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 C2CD4BA6NLJ0 364 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 MID1O15344 667 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 SEMA4FO95754 770 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 GNSP15586 552 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 GSCP56915 257 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-203ENST00000400772 ATP11AP98196 1134 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 C15orf59Q2T9L4 293 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-203ENST00000400772 RNF219Q5W0B1 726 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-203ENST00000400772 PSAPL1Q6NUJ1 521 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 USP30Q70CQ3 517 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 IRF2BP2Q7Z5L9 587 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 FAM131BQ86XD5 332 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 PHF13Q86YI8 300 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-203ENST00000400772 ZCCHC9Q8N567 271 aaKnown RBP16.3■□□□□ 0.2
ATG4B-203ENST00000400772 HAPLN3Q96S86 360 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 PSMB7Q99436 277 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 AGPAT1Q99943 283 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 ORAI3Q9BRQ5 295 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 MIR1-1HGQ9H1L0 117 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 NEUROG2Q9H2A3 272 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 SGK2Q9HBY8 427 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 FBXL12Q9NXK8 326 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 MPP6Q9NZW5 540 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 ADAM22Q9P0K1 906 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 ZNF212Q9UDV6 495 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 SCML1Q9UN30 329 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-203ENST00000400772 PAXBP1Q9Y5B6 917 aa16.3■□□□□ 0.2
ATG4B-203ENST00000400772 A0A1W2PP55 124 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms