RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 LBX2Q6XYB7 198 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 CAND1Q86VP6 1230 aaKnown RBP17.45■□□□□ 0.38
PTPRA-205ENST00000399903 TFAP2BQ92481 460 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 PPP1R14BQ96C90 147 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 PDGFCQ9NRA1 345 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 FUOMA2VDF0 154 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 HTR3EA5X5Y0 456 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 SAC3D1A6NKF1 404 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 PLIN3O60664 434 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 H6PDO95479 791 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 ZNF23P17027 643 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 GABRB2P47870 512 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 SLC10A2Q12908 348 aaPredicted RBP17.45■□□□□ 0.38
PTPRA-205ENST00000399903 PCLAFQ15004 111 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 TGFBIQ15582 683 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 UTS2BQ765I0 119 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 SNX31Q8N9S9 440 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 IRGQQ8WZA9 623 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 SORT1Q99523 831 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 GPATCH1Q9BRR8 931 aaKnown RBP17.45■□□□□ 0.38
PTPRA-205ENST00000399903 CEP41Q9BYV8 373 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 WDR41Q9HAD4 459 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 C17orf75Q9HAS0 396 aa17.45■□□□□ 0.38
PTPRA-205ENST00000399903 CYP2C8P10632 490 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 STAT5BP51692 787 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 ITGADQ13349 1161 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 C16orf89Q6UX73 402 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 UNKQ9C0B0 810 aaKnown RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 BRD8Q9H0E9 1235 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PDLIM7Q9NR12 457 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PLK2Q9NYY3 685 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 ARHGAP28Q9P2N2 729 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 EMCNQ9ULC0 261 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 USP18Q9UMW8 372 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 CLIC3O95833 236 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 C4BPAP04003 597 aaKnown RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 KRT19P08727 400 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 ME2P23368 584 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PGGT1BP53609 377 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PHEXP78562 749 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 SLC25A11Q02978 314 aaKnown RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 TMEM132AQ24JP5 1023 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PTPN20Q4JDL3 420 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 LDLRAP1Q5SW96 308 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 ELMSAN1Q6PJG2 1045 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 TDRD5Q8NAT2 981 aaKnown RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 RTKNQ9BST9 563 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 NOL11Q9H8H0 719 aaKnown RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 SPATA7Q9P0W8 599 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PSAT1Q9Y617 370 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 FARP2O94887 1054 aaPredicted RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 GSTT2P0CG29 244 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 GSTT2BP0CG30 244 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 CPA3P15088 417 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 RAP1GAPP47736 663 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 BCAR1P56945 870 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 RALGDSQ12967 914 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 C15orf59Q2T9L4 293 aaPredicted RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 TTC33Q6PID6 262 aaPredicted RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 IFNLR1Q8IU57 520 aaPredicted RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 SLC7A5P1Q8MH63 180 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 CENPSQ8N2Z9 138 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 ST6GALNAC4Q9H4F1 302 aa17.44■□□□□ 0.38
PTPRA-205ENST00000399903 NGRNQ9NPE2 291 aaKnown RBP17.44■□□□□ 0.38
PTPRA-205ENST00000399903 PHIPQ8WWQ0 1821 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 MAFGO15525 162 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 SERPINB7O75635 380 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 UGT1A6P19224 532 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 UGT1A1P22309 533 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 UGT1A4P22310 534 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 L1CAMP32004 1257 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 UGT1A3P35503 534 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 UGT1A5P35504 534 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 PHKA2P46019 1235 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 OAZ1P54368 228 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 MYL6P60660 151 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 MGAT5BQ3V5L5 792 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 EGFLAMQ63HQ2 1017 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 SLC15A3Q8IY34 581 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 ISOC1Q96CN7 298 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 CDHR1Q96JP9 859 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 PPP1R10Q96QC0 940 aaKnown RBP17.43■□□□□ 0.38
PTPRA-205ENST00000399903 SLC29A1Q99808 456 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 XPNPEP3Q9NQH7 507 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 CISHQ9NSE2 258 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 PAK5Q9P286 719 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 EFR3BQ9Y2G0 817 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 C1orf232A0A0U1RR37 186 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 ADAM23O75077 832 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 GLRA3O75311 464 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 HMGCRP04035 888 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 FUCA1P04066 466 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 ALDOAP04075 364 aaKnown RBP17.43■□□□□ 0.38
PTPRA-205ENST00000399903 TFE3P19532 575 aaPredicted RBP17.43■□□□□ 0.38
PTPRA-205ENST00000399903 HMOX2P30519 316 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 TFAMQ00059 246 aaKnown RBP17.43■□□□□ 0.38
PTPRA-205ENST00000399903 GNA12Q03113 381 aa17.43■□□□□ 0.38
PTPRA-205ENST00000399903 NME3Q13232 169 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms