RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 SLC47A2Q86VL8 602 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 METTL6Q8TCB7 284 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 ANKRD7Q92527 254 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 C1orf50Q9BV19 199 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 CAB39LQ9H9S4 337 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 TMEM138Q9NPI0 162 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 THAP1Q9NVV9 213 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 CMTM6Q9NX76 183 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 CRNNQ9UBG3 495 aaPredicted RBP12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 OPTCQ9UBM4 332 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 SNCAIPQ9Y6H5 919 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 IFNA16P05015 189 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 TPH1P17752 444 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 MGAT1P26572 445 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 CDC42P60953 191 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 NOL9Q5SY16 702 aaKnown RBP12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 STYK1Q6J9G0 422 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 ZDHHC13Q8IUH4 622 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 SMYD1Q8NB12 490 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 DAGLBQ8NCG7 672 aa12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 QKIQ96PU8 341 aaKnown RBP eCLIP12.52□□□□□ -0.4
CACNA1C-219ENST00000399649 BTN3A3O00478 584 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 NAB1Q13506 487 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 FAM187BQ17R55 369 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 USP45Q70EL2 814 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 ZDHHC17Q8IUH5 632 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 OXNAD1Q96HP4 312 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 PPP1R16AQ96I34 528 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 TEKT5Q96M29 485 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 ZNF222Q9UK12 451 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 TRHDEQ9UKU6 1024 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 A2ML1A8K2U0 1454 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 IQCMA0A1B0GVH7 501 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 NR2C2P49116 596 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 STARP49675 285 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 TUBP50607 506 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 RAB27AP51159 221 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 RAB2AP61019 212 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 SLC34A1Q06495 639 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 NFE2Q16621 373 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 ADHFE1Q8IWW8 467 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 FBXO16Q8IX29 292 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 DHRSXQ8N5I4 330 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 APOPT1Q96IL0 206 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 DCUN1D5Q9BTE7 237 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 DEFB129Q9H1M3 183 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 ATXN3LQ9H3M9 355 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 PCDH9Q9HC56 1237 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 CISHQ9NSE2 258 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 TOR4AQ9NXH8 423 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 POLD2P49005 469 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 MYBPC1Q00872 1141 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 GPSM1Q86YR5 675 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 ENGASEQ8NFI3 743 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 SMARCD1Q96GM5 515 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 MAML3Q96JK9 1138 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 SNX6Q9UNH7 406 aa12.52□□□□□ -0.41
CACNA1C-219ENST00000399649 ABCC3O15438 1527 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 TAF4O00268 1085 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 SLC37A4O43826 429 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 NPTX2P47972 431 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 POLR2LP62875 67 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 TSHZ1Q6ZSZ6 1077 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 C8orf59Q8N0T1 100 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 NUAK2Q9H093 628 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 COG5Q9UP83 839 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 C15orf38-AP3S2A0A0A6YYH1 394 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 CCDC182A6NF36 153 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 NKRFO15226 690 aaKnown RBP eCLIP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 SGTAO43765 313 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 MICAL2O94851 1124 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 CYP1A1P04798 512 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 GP5P40197 560 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 PYDC2Q56P42 97 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 ARPINQ7Z6K5 226 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 EXOC3L1Q86VI1 746 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 MROH8Q9H579 483 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 RBM7Q9Y580 266 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 SETD1BQ9UPS6 1966 aaKnown RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 TNFRSF21O75509 655 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 AMHP03971 560 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 OMPP47874 163 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 CBFBQ13951 182 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 TTC23Q5W5X9 447 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 LGI2Q8N0V4 545 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 CXorf40AQ8TE69 158 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 FAM126AQ9BYI3 521 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 MFSD1Q9H3U5 465 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 CATSPERZQ9NTU4 200 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 KPNA5O15131 536 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 XYLBO75191 536 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 PTPN11Q06124 597 aaPredicted RBP12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 GPAT3Q53EU6 434 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 FBXO47Q5MNV8 452 aa12.51□□□□□ -0.41
CACNA1C-219ENST00000399649 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms