RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 ZWILCHQ9H900 591 aa18.16■□□□□ 0.5
CTNS-203ENST00000399306 INTS6Q9UL03 887 aaKnown RBP18.16■□□□□ 0.5
CTNS-203ENST00000399306 ADGRG1Q9Y653 693 aa18.16■□□□□ 0.5
CTNS-203ENST00000399306 CACNA1HO95180 2353 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 RCCD1A6NED2 376 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 ZNF487B1APH4 448 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 LAMTOR5O43504 91 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 RHOCP08134 193 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 SRPRAP08240 638 aaKnown RBP18.15■□□□□ 0.5
CTNS-203ENST00000399306 NTSR1P30989 418 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 CXCL12P48061 93 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 IRAK1P51617 712 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 TPI1P60174 286 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 PDK2Q15119 407 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 ZNF528Q3MIS6 628 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 FUT11Q495W5 492 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 PITRM1Q5JRX3 1037 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 SDE2Q6IQ49 451 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 RWDD4Q6NW29 188 aaKnown RBP18.15■□□□□ 0.5
CTNS-203ENST00000399306 CIR1Q86X95 450 aaPredicted RBP18.15■□□□□ 0.5
CTNS-203ENST00000399306 MAP7D3Q8IWC1 876 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 PYROXD2Q8N2H3 581 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 CAMKK1Q8N5S9 505 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 RNF10Q8N5U6 811 aaKnown RBP18.15■□□□□ 0.5
CTNS-203ENST00000399306 KCTD15Q96SI1 283 aaPredicted RBP18.15■□□□□ 0.5
CTNS-203ENST00000399306 GABRG3Q99928 467 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 FEM1AQ9BSK4 669 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 FAM126AQ9BYI3 521 aaPredicted RBP18.15■□□□□ 0.5
CTNS-203ENST00000399306 LACRTQ9GZZ8 138 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 IRF2BPLQ9H1B7 796 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 MAGEH1Q9H213 219 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 MPP6Q9NZW5 540 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 HCN2Q9UL51 889 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 PLA2G4CQ9UP65 541 aa18.15■□□□□ 0.5
CTNS-203ENST00000399306 CCDC163A0A0D9SF12 145 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 H3BRJ5 948 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 EEF2KO00418 725 aaKnown RBP18.14■□□□□ 0.49
CTNS-203ENST00000399306 CREB3O43889 395 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 BUB1BO60566 1050 aaPredicted RBP18.14■□□□□ 0.49
CTNS-203ENST00000399306 C7P10643 843 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 TIE1P35590 1138 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 ARL4AP40617 200 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 CSKP41240 450 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 YBEYP58557 167 aaPredicted RBP18.14■□□□□ 0.49
CTNS-203ENST00000399306 CA9Q16790 459 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 C2orf27AQ580R0 203 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 SFTPA1Q8IWL2 248 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 UMODL1-AS1Q8N2C9 162 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 LZTR1Q8N653 840 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 DCAF4L2Q8NA75 395 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 TPCN2Q8NHX9 752 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 C2orf49Q9BVC5 232 aaPredicted RBP18.14■□□□□ 0.49
CTNS-203ENST00000399306 CIPCQ9C0C6 399 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 PRDM16Q9HAZ2 1276 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.14■□□□□ 0.49
CTNS-203ENST00000399306 SPATA6Q9NWH7 488 aaPredicted RBP18.14■□□□□ 0.49
CTNS-203ENST00000399306 ALG6Q9Y672 507 aa18.14■□□□□ 0.49
CTNS-203ENST00000399306 CKAP5Q14008 2032 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 MUC22E2RYF6 1773 aaPredicted RBP18.13■□□□□ 0.49
CTNS-203ENST00000399306 PSTPIP1O43586 416 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 KRT86O43790 486 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 CCDC175P0C221 793 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 TCF4P15884 667 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 ARSEP51690 589 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 DGKEP52429 567 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 NDST2P52849 883 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 SEC13P55735 322 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 GNA12Q03113 381 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 DPYSQ14117 519 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 PARP15Q460N3 678 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 EGFLAMQ63HQ2 1017 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 RFX8Q6ZV50 586 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 RHOT1Q8IXI2 618 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 TSC1Q92574 1164 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 ZNF670Q9BS34 389 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 MAGEB5Q9BZ81 275 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 FBRSQ9HAH7 460 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 PCDH18Q9HCL0 1135 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 GPATCH2LQ9NWQ4 482 aa18.13■□□□□ 0.49
CTNS-203ENST00000399306 DDX56Q9NY93 547 aaKnown RBP18.13■□□□□ 0.49
CTNS-203ENST00000399306 CWC15Q9P013 229 aaKnown RBP18.13■□□□□ 0.49
CTNS-203ENST00000399306 ARIH1Q9Y4X5 557 aaPredicted RBP18.13■□□□□ 0.49
CTNS-203ENST00000399306 NUP205Q92621 2012 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 KLF8O95600 359 aaPredicted RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 MZF1P28698 734 aaPredicted RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 SSR1P43307 286 aaKnown RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 NRLP54845 237 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 TAS2R40P59535 323 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 ECT2LQ008S8 904 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 SLC20A2Q08357 652 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 ZNF234Q14588 700 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 CRY1Q16526 586 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 PPP6R3Q5H9R7 873 aaPredicted RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 KCNT1Q5JUK3 1230 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 EMC10Q5UCC4 262 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 DAB2IPQ5VWQ8 1189 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 RNF219Q5W0B1 726 aaPredicted RBP18.12■□□□□ 0.49
CTNS-203ENST00000399306 TXNRD3NBQ6F5E7 133 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 PKN3Q6P5Z2 889 aa18.12■□□□□ 0.49
CTNS-203ENST00000399306 TFAP2DQ7Z6R9 452 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms