RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 CHUKO15111 745 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 C1QAP02745 245 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TKTP29401 623 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 PRDX6P30041 224 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 MRPL19P49406 292 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 DCAF6Q58WW2 860 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ANKRD20A2Q5SQ80 823 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ANKRD20A1Q5TYW2 823 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ANKRD20A3Q5VUR7 823 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TRPM8Q7Z2W7 1104 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SPATA21Q7Z572 469 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 CAND1Q86VP6 1230 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 ZBED8Q8IZ13 594 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TRPV1Q8NER1 839 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 LRIG1Q96JA1 1093 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ULBP1Q9BZM6 244 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 LRMDAQ9H2I8 198 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RABEP2Q9H5N1 569 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 KRT82Q9NSB4 513 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SOX13Q9UN79 622 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 AP1M2Q9Y6Q5 423 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RNF103O00237 685 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ZMYND10O75800 440 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GABBR2O75899 941 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 LRIG2O94898 1065 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 CHRNA1P02708 482 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 AP1S1P61966 158 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SOX4Q06945 474 aaPredicted RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 KCNA10Q16322 511 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PCID2Q5JVF3 399 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 HHATQ5VTY9 493 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ITIH5Q86UX2 942 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 FAM193BQ96PV7 902 aaPredicted RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 C1orf21Q9H246 121 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 WDCPQ9H6R7 721 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ZNF408Q9H9D4 720 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM248Q9NWD8 314 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 USTQ9Y2C2 406 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 VWA8A3KMH1 1905 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TYW5A2RUC4 315 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM114B3SHH9 223 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GOLGA8MH3BSY2 632 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 APRTP07741 180 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 CSRP3P50461 194 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 HNRNPH2P55795 449 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 RAB33AQ14088 237 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 DMC1Q14565 340 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PRR23BQ6ZRT6 265 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 FAM217AQ8IXS0 508 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 STK40Q8N2I9 435 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GPR150Q8NGU9 434 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ZSCAN18Q8TBC5 510 aaPredicted RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 TMEM121Q9BTD3 319 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 C8orf4Q9NR00 106 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PIGVQ9NUD9 493 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SEPT3Q9UH03 358 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 XPO7Q9UIA9 1087 aaKnown RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 PLLPQ9Y342 182 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ALDH2P05091 517 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RB1P06400 928 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 MYL3P08590 195 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GSTM1P09488 218 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ELK3P41970 407 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PLK1P53350 603 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GSTM4Q03013 218 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SKIDA1Q1XH10 827 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 COQ5Q5HYK3 327 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ZDHHC20Q5W0Z9 365 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PRUNE1Q86TP1 453 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 CERS2Q96G23 380 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 UIMC1Q96RL1 719 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GPR22Q99680 433 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SLC2A11Q9BYW1 496 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PITPNM3Q9BZ71 974 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RGSL1A5PLK6 1076 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 PEX10O60683 326 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 SOCS5O75159 536 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ACSL3O95573 720 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 MPOP05164 745 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RBP1P09455 135 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 THPOP40225 353 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 GJC2Q5T442 439 aaPredicted RBP6□□□□□ -1.45
PTPRD-206ENST00000397617 TRNP1Q6NT89 227 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 EMC1Q8N766 993 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 RIN3Q8TB24 985 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 LRRC37BQ96QE4 947 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 TRIM31Q9BZY9 425 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 CRISPLD2Q9H0B8 497 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 ATP13A1Q9HD20 1204 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 VTI1BQ9UEU0 232 aa6□□□□□ -1.45
PTPRD-206ENST00000397617 AHCTF1Q8WYP5 2266 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SPTLC1O15269 473 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 YWHAQP27348 245 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 DNA2P51530 1060 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 BASP1P80723 227 aaKnown RBP5.99□□□□□ -1.45
PTPRD-206ENST00000397617 HERC3Q15034 1050 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 USP41Q3LFD5 358 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 NCBP2-AS2Q69YL0 99 aa5.99□□□□□ -1.45
PTPRD-206ENST00000397617 SCARA5Q6ZMJ2 495 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms