RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PRPF19Q9UMS4 504 aaKnown RBP9.38□□□□□ -0.91
CAPN3-206ENST00000397163 PCDHB12Q9Y5F1 795 aa9.38□□□□□ -0.91
CAPN3-206ENST00000397163 PRKCGP05129 697 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CXCL8P10145 99 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ENO3P13929 434 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CD1EP15812 388 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 PIK3R1P27986 724 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 GARSP41250 739 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SLC5A3P53794 718 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 NIPAL4Q0D2K0 466 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 PPM1LQ5SGD2 360 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 LPCAT2Q7L5N7 544 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 FAM83AQ86UY5 434 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 DSELQ8IZU8 1212 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 TDRD5Q8NAT2 981 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ADCY4Q8NFM4 1077 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 MAPK15Q8TD08 544 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 DQX1Q8TE96 717 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 DHX35Q9H5Z1 703 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF696Q9H7X3 374 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 RRN3Q9NYV6 651 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 PIM2Q9P1W9 311 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 THEGQ9P2T0 379 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 AFG3L2Q9Y4W6 797 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 TRIM17Q9Y577 477 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CEPT1Q9Y6K0 416 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CILPO75339 1184 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ITGB3P05106 788 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ERVK-10P10266 1014 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 VDRP11473 427 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CDKL1Q00532 357 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SEMA5AQ13591 1074 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 INSCQ1MX18 579 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ZFP1Q6P2D0 407 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 BBS5Q8N3I7 341 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 BHLHE22Q8NFJ8 381 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SREK1Q8WXA9 508 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ZNF670Q9BS34 389 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 NIFKQ9BYG3 293 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 BCO2Q9BYV7 579 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 WDR55Q9H6Y2 383 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 RPF1Q9H9Y2 349 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SIX4Q9UIU6 781 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 RGSL1A5PLK6 1076 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 BTBD19C9JJ37 291 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 INO80B-WBP1J3KQ70 363 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 B4GALT4O60513 344 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 ALDH1A2O94788 518 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 NFICP08651 508 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 TCF7P36402 384 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 TMED10P49755 219 aaKnown RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 NR1H2P55055 460 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CDH15P55291 814 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SLC10A2Q12908 348 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 DCAF6Q58WW2 860 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 FKBP1CQ5VVH2 108 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 STEAP4Q687X5 459 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CYS1Q717R9 158 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 CCDC80Q76M96 950 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SAPCD2Q86UD0 394 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 LRRC71Q8N4P6 559 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 TRIML2Q8N7C3 387 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 PKP2Q99959 881 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 FERMT1Q9BQL6 677 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 HEPHQ9BQS7 1158 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 INO80BQ9C086 356 aaPredicted RBP9.37□□□□□ -0.91
CAPN3-206ENST00000397163 SNX15Q9NRS6 342 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 RIMS3Q9UJD0 308 aa9.37□□□□□ -0.91
CAPN3-206ENST00000397163 OXSR1O95747 527 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 PGAM1P18669 254 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 GP5P40197 560 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 EIF2B2P49770 351 aaKnown RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 ART3Q13508 389 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 NRF1Q16656 503 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 CCDC153Q494R4 210 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 ATF7IP2Q5U623 682 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 METTL21CQ5VZV1 264 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 NXNQ6DKJ4 435 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 ELMSAN1Q6PJG2 1045 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 MPZL3Q6UWV2 235 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 Q6ZNX1 250 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 RCN3Q96D15 328 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 TBCBQ99426 244 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 CCT7Q99832 543 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 PAIP1Q9H074 479 aaKnown RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 ACSS2Q9NR19 701 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 EBF1Q9UH73 591 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 RSL24D1Q9UHA3 163 aaKnown RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 TSPAN16Q9UKR8 245 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 AMHP03971 560 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 P4HA1P13674 534 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 TCN1P20061 433 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-206ENST00000397163 HSPA13P48723 471 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 STAT5BP51692 787 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 MAPK10P53779 464 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 LAMTOR4Q0VGL1 99 aa9.36□□□□□ -0.91
CAPN3-206ENST00000397163 TGFBIQ15582 683 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms