RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 C8orf48Q96LL4 319 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 SH3GL2Q99962 352 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 RASSF4Q9H2L5 321 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 ACSS3Q9H6R3 686 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 LRRC4CQ9HCJ2 640 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 SLC39A10Q9ULF5 831 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 C5orf60A6NFR6 353 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 E9PAM4 449 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TIMM44O43615 452 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 PFKMP08237 780 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TFE3P19532 575 aaPredicted RBP12.17□□□□□ -0.46
ATN1-202ENST00000396684 SCNN1BP51168 640 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 CRADDP78560 199 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 SMAD3P84022 425 aaKnown RBP12.17□□□□□ -0.46
ATN1-202ENST00000396684 GPR17Q13304 367 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 SLC39A5Q6ZMH5 540 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 RNF135Q8IUD6 432 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 FAM111AQ96PZ2 611 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 EBNA1BP2Q99848 306 aaKnown RBP12.17□□□□□ -0.46
ATN1-202ENST00000396684 IARS2Q9NSE4 1012 aaKnown RBP12.17□□□□□ -0.46
ATN1-202ENST00000396684 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 CYP11A1P05108 521 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 RFC2P35250 354 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 MPP3Q13368 585 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 CLLU1OSQ5K130 101 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 CES3Q6UWW8 571 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TAS2R42Q7RTR8 314 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 EXT2Q93063 718 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TBL1YQ9BQ87 522 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 SLC38A8A6NNN8 435 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 KCNU1A8MYU2 1149 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 M0QZQ0 153 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 GCATO75600 419 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TPSB2P20231 275 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TPSAB1Q15661 275 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 TEX44Q53QW1 395 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
ATN1-202ENST00000396684 SPANXN3Q5MJ09 141 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 RETSATQ6NUM9 610 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 ELMO2Q96JJ3 720 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 IL22Q9GZX6 179 aa12.17□□□□□ -0.46
ATN1-202ENST00000396684 UBA2Q9UBT2 640 aaPredicted RBP12.17□□□□□ -0.46
ATN1-202ENST00000396684 ZNFX1Q9P2E3 1918 aaKnown RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 SCAMP3O14828 347 aaKnown RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 ENDOD1O94919 500 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 S100BP04271 92 aaPredicted RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 ITGB1P05556 798 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 SPATA31D3P0C874 917 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 PYGBP11216 843 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 RHOAP61586 193 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 MGAT3Q09327 533 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 DNAJC3Q13217 504 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 FAM26DQ5JW98 314 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 SLC9A4Q6AI14 798 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 SPATA31D4Q6ZUB0 917 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 COLGALT2Q8IYK4 626 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 GLIS1Q8NBF1 620 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 TSPAN17Q96FV3 270 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 HAPLN3Q96S86 360 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 GPR62Q9BZJ7 368 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 POLR1EQ9GZS1 481 aaKnown RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 SEPT3Q9UH03 358 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 ANKRD65E5RJM6 399 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 NCBP2-AS2Q69YL0 99 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 CCNYL1Q8N7R7 359 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 ARMC2Q8NEN0 867 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 USP13Q92995 863 aaPredicted RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 TSSK1BQ9BXA7 367 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 ASAH2Q9NR71 780 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 STK39Q9UEW8 545 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 STK38LQ9Y2H1 464 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 PLXNB2O15031 1838 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 E2F8A0AVK6 867 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 E5RI56 91 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 XYLBO75191 536 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 RHOQP17081 205 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 GP5P40197 560 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 MAGEA11P43364 429 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 DSC3Q14574 896 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 FASTKD3Q14CZ7 662 aaKnown RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 SIX1Q15475 284 aaPredicted RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 MAP7D1Q3KQU3 841 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 C16orf59Q7L2K0 433 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 GPRIN1Q7Z2K8 1008 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 LRRC34Q8IZ02 419 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 CASP10Q92851 521 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 ACTR5Q9H9F9 607 aaPredicted RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 TMPRSS4Q9NRS4 437 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 USP15Q9Y4E8 981 aaPredicted RBP12.16□□□□□ -0.46
ATN1-202ENST00000396684 SLC30A1Q9Y6M5 507 aa12.16□□□□□ -0.46
ATN1-202ENST00000396684 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
ATN1-202ENST00000396684 NDUFS3O75489 264 aa12.15□□□□□ -0.46
ATN1-202ENST00000396684 CXCR3P49682 368 aa12.15□□□□□ -0.46
ATN1-202ENST00000396684 GPR15P49685 360 aa12.15□□□□□ -0.46
ATN1-202ENST00000396684 ARFIP2P53365 341 aa12.15□□□□□ -0.46
ATN1-202ENST00000396684 PITX1P78337 314 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms