RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CBX6O95503 412 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CKMP06732 381 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ITGB3BPQ13352 177 aaPredicted RBP14.21□□□□□ -0.13
COL4A3-202ENST00000396578 WDR49Q8IV35 697 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 TMEM169Q96HH4 297 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CAMTA2O94983 1202 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ACADMP11310 421 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF7P17097 686 aaPredicted RBP14.21□□□□□ -0.13
COL4A3-202ENST00000396578 PTPN3P26045 913 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ARHGDIBP52566 201 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CDC42P60953 191 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 TNK2Q07912 1038 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 BST2Q10589 180 aaKnown RBP14.21□□□□□ -0.13
COL4A3-202ENST00000396578 BIKQ13323 160 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 SMYD1Q8NB12 490 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 BPIFB6Q8NFQ5 453 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 APBA2Q99767 749 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 TDRKHQ9Y2W6 561 aaKnown RBP14.21□□□□□ -0.13
COL4A3-202ENST00000396578 DAGLAQ9Y4D2 1042 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 MSH4O15457 936 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 TCF4P15884 667 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ITGB6P18564 788 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CDH3P22223 829 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 MGAT1P26572 445 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ZNF571Q7Z3V5 609 aaPredicted RBP14.21□□□□□ -0.13
COL4A3-202ENST00000396578 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 KBTBD8Q8NFY9 601 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 MCOLN3Q8TDD5 553 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 HAT1O14929 419 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ADCY6O43306 1168 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CBFA2T3O75081 653 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ADSSP30520 456 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 ZSWIM2Q8NEG5 633 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 LENG1Q96BZ8 264 aaPredicted RBP14.21□□□□□ -0.13
COL4A3-202ENST00000396578 SLC38A2Q96QD8 506 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CYP3A43Q9HB55 503 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 RNF181Q9P0P0 153 aa14.21□□□□□ -0.13
COL4A3-202ENST00000396578 CYP1A1P04798 512 aaPredicted RBP14.21□□□□□ -0.14
COL4A3-202ENST00000396578 OR56A5P0C7T3 313 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 RPL21P46778 160 aaKnown RBP14.21□□□□□ -0.14
COL4A3-202ENST00000396578 MSLNQ13421 630 aaPredicted RBP14.21□□□□□ -0.14
COL4A3-202ENST00000396578 HLA-DQA1Q5Y7H0 255 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 PACS2Q86VP3 889 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 GPSM1Q86YR5 675 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 ENGASEQ8NFI3 743 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 PSMA8Q8TAA3 256 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 PLA2G4CQ9UP65 541 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 LRRC14BA6NHZ5 514 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 YY1P25490 414 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 CCR1P32246 355 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 SLC26A3P40879 764 aa14.21□□□□□ -0.14
COL4A3-202ENST00000396578 ELF3P78545 371 aaPredicted RBP14.21□□□□□ -0.14
COL4A3-202ENST00000396578 PLOD3O60568 738 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CD44P16070 742 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 IDH2P48735 452 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 INTS11Q5TA45 600 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CCDC59Q9P031 241 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 IKZF3Q9UKT9 509 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CORO2BQ9UQ03 480 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 ERGIC3Q9Y282 383 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 N6AMT1Q9Y5N5 214 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 LIN7AO14910 233 aaPredicted RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 RAB2AP61019 212 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 EZH2Q15910 746 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 SEZ6Q53EL9 994 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 RPTNQ6XPR3 784 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TBL1YQ9BQ87 522 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TBCDQ9BTW9 1192 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TRHDEQ9UKU6 1024 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TMCO1Q9UM00 188 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 SORCS3Q9UPU3 1222 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 PSMD11O00231 422 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CTDNEP1O95476 244 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 ZDHHC17Q8IUH5 632 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TOR4AQ9NXH8 423 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 KPNA6O60684 536 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TMCC2O75069 709 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 ITGA3P26006 1051 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 GPR1P46091 355 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 IL2P60568 153 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TNS3Q68CZ2 1445 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 ZKSCAN4Q969J2 545 aaPredicted RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 POP1Q99575 1024 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 WDR12Q9GZL7 423 aaKnown RBP14.2□□□□□ -0.14
COL4A3-202ENST00000396578 GPATCH2LQ9NWQ4 482 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CHRNGP07510 517 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 STAG3L1P0CL83 205 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 ZNF470Q6ECI4 717 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 SIX5Q8N196 739 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 PLGRKTQ9HBL7 147 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 IQCMA0A1B0GVH7 501 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 THPOP40225 353 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 ABATP80404 500 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 GNASQ5JWF2 1037 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 TTI2Q6NXR4 508 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 CLEC10AQ8IUN9 316 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 HTR3CQ8WXA8 447 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 COX4I2Q96KJ9 171 aa14.2□□□□□ -0.14
COL4A3-202ENST00000396578 MNTQ99583 582 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms