RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 TSGA13Q96PP4 275 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SRPK1Q96SB4 655 aaKnown RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 MLPHQ9BV36 600 aaPredicted RBP15.31■□□□□ 0.04
CBX3-202ENST00000396386 LRRC40Q9H9A6 602 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SLCO1B3Q9NPD5 702 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 CASS4Q9NQ75 786 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 HAUS2Q9NVX0 235 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 MARCH5Q9NX47 278 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 VANGL2Q9ULK5 521 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SLC12A4Q9UP95 1085 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 SCN5AQ14524 2016 aa15.31■□□□□ 0.04
CBX3-202ENST00000396386 NUP205Q92621 2012 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 RFPL1O75677 317 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 MOCS2O96007 188 aaPredicted RBP15.3■□□□□ 0.04
CBX3-202ENST00000396386 FGFR3P22607 806 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 ETV4P43268 484 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 VEGFBP49765 207 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 GATMP50440 423 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 MRPL58Q14197 206 aaKnown RBP15.3■□□□□ 0.04
CBX3-202ENST00000396386 FYB2Q5VWT5 728 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 ZNF449Q6P9G9 518 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 NPAS4Q8IUM7 802 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 ARHGAP12Q8IWW6 846 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 DPF3Q92784 378 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 MRPL9Q9BYD2 267 aaKnown RBP15.3■□□□□ 0.04
CBX3-202ENST00000396386 C12orf65Q9H3J6 166 aaKnown RBP15.3■□□□□ 0.04
CBX3-202ENST00000396386 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 BFARQ9NZS9 450 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 GMIPQ9P107 970 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 NUDT5Q9UKK9 219 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 TLR6Q9Y2C9 796 aa15.3■□□□□ 0.04
CBX3-202ENST00000396386 WDR91A4D1P6 747 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 KCNU1A8MYU2 1149 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 E9PAM4 449 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 PSMD3O43242 534 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 JCHAINP01591 159 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 SLC2A3P11169 496 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 CPB1P15086 417 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 CCNCP24863 283 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 SLC11A1P49279 550 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 MGAT5Q09328 741 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 ELAVL2Q12926 359 aaKnown RBP15.29■□□□□ 0.04
CBX3-202ENST00000396386 GPNMBQ14956 572 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 FUT10Q6P4F1 479 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 PACS1Q6VY07 963 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 UNC5BQ8IZJ1 945 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 ZNF276Q8N554 614 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 DNAAF3Q8N9W5 541 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 RMDN2Q96LZ7 410 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 HS3ST4Q9Y661 456 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 AP3B1O00203 1094 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 USP12O75317 370 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 DNAJC8O75937 253 aaPredicted RBP15.29■□□□□ 0.04
CBX3-202ENST00000396386 UBOX5O94941 541 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 RTN3O95197 1032 aaPredicted RBP15.29■□□□□ 0.04
CBX3-202ENST00000396386 OLIG2Q13516 323 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 MROH9Q5TGP6 573 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 NAPEPLDQ6IQ20 393 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 TIFABQ6ZNK6 161 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 OTOAQ7RTW8 1153 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 TTC9BQ8N6N2 239 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 RTL3Q8N8U3 475 aaKnown RBP15.29■□□□□ 0.04
CBX3-202ENST00000396386 SPPL2BQ8TCT7 592 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 FBXO32Q969P5 355 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 ZNF669Q96BR6 464 aaPredicted RBP15.29■□□□□ 0.04
CBX3-202ENST00000396386 CERS2Q96G23 380 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 TMEM175Q9BSA9 504 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 GPR62Q9BZJ7 368 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 MANSC1Q9H8J5 431 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 RXFP1Q9HBX9 757 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 PCMTD2Q9NV79 361 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 IL37Q9NZH6 218 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 USH1CQ9Y6N9 552 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 RPS6KL1Q9Y6S9 549 aa15.29■□□□□ 0.04
CBX3-202ENST00000396386 TTC3P53804 2025 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 H7C4K7 107 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 ALDH2P05091 517 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 TROVE2P10155 538 aaKnown RBP eCLIP15.28■□□□□ 0.04
CBX3-202ENST00000396386 YWHAQP27348 245 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 SERPINB4P48594 390 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 TUBP50607 506 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 ARPP19P56211 112 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 TBX4P57082 545 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 USP46P62068 366 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 CCDC15Q0P6D6 951 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 FRG1Q14331 258 aaKnown RBP15.28■□□□□ 0.04
CBX3-202ENST00000396386 TTC31Q49AM3 519 aaPredicted RBP15.28■□□□□ 0.04
CBX3-202ENST00000396386 FAM133BQ5BKY9 247 aaKnown RBP15.28■□□□□ 0.04
CBX3-202ENST00000396386 TIGD7Q6NT04 549 aaPredicted RBP15.28■□□□□ 0.04
CBX3-202ENST00000396386 ARHGAP36Q6ZRI8 547 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 ATAD1Q8NBU5 361 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 ZSCAN18Q8TBC5 510 aaPredicted RBP15.28■□□□□ 0.04
CBX3-202ENST00000396386 USP33Q8TEY7 942 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 SH3TC2Q8TF17 1288 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 SLC39A13Q96H72 371 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 B3GALT6Q96L58 329 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 UNC93B1Q9H1C4 597 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 OLA1Q9NTK5 396 aaKnown RBP15.28■□□□□ 0.04
CBX3-202ENST00000396386 ZFATQ9P243 1243 aa15.28■□□□□ 0.04
CBX3-202ENST00000396386 FNIP2Q9P278 1114 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms