RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.18■□□□□ 0.34
NUP50-202ENST00000396096 FCRL3Q96P31 734 aaPredicted RBP17.18■□□□□ 0.34
NUP50-202ENST00000396096 HAPLN3Q96S86 360 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 ZFATQ9P243 1243 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 SLC17A6Q9P2U8 582 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 EMCNQ9ULC0 261 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 STK38LQ9Y2H1 464 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PSAT1Q9Y617 370 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 FNDC1Q4ZHG4 1894 aaPredicted RBP17.18■□□□□ 0.34
NUP50-202ENST00000396096 NUP205Q92621 2012 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 FAM237BA0A1B0GVD1 139 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 AP3B1O00203 1094 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PSMD3O43242 534 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.18■□□□□ 0.34
NUP50-202ENST00000396096 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PTCD3Q96EY7 689 aaKnown RBP17.18■□□□□ 0.34
NUP50-202ENST00000396096 TMEM209Q96SK2 561 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 ABCC13Q9NSE7 274 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 PCDHB8Q9UN66 801 aa17.18■□□□□ 0.34
NUP50-202ENST00000396096 RPL26L1Q9UNX3 145 aaKnown RBP17.18■□□□□ 0.34
NUP50-202ENST00000396096 ZCWPW2A0A1B0GU75 182 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 TNFRSF10BO14763 440 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 ATP5BP06576 529 aaKnown RBP17.17■□□□□ 0.34
NUP50-202ENST00000396096 MYL2P10916 166 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 NFKB1P19838 968 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 CCND1P24385 295 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 DNAJB2P25686 324 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 SERPINB3P29508 390 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 PRKCZQ05513 592 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 C4orf50Q6ZRC1 276 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 PCSK9Q8NBP7 692 aaKnown RBP17.17■□□□□ 0.34
NUP50-202ENST00000396096 AGAP3Q96P47 875 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 TBC1D10AQ9BXI6 508 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 SMOC2Q9H3U7 446 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 INPP5FQ9Y2H2 1132 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 THSD7BQ9C0I4 1608 aa17.17■□□□□ 0.34
NUP50-202ENST00000396096 A8MUI8 341 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 PLIN3O60664 434 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 ERVK-10P10266 1014 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 CCND3P30281 292 aaPredicted RBP17.16■□□□□ 0.34
NUP50-202ENST00000396096 STX3Q13277 289 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 OLIG2Q13516 323 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 ANKRD20A4Q4UJ75 823 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 MANEALQ5VSG8 457 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 AGAP11Q8TF27 550 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 HASPINQ8TF76 798 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 RNF34Q969K3 372 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 ZNF669Q96BR6 464 aaPredicted RBP17.16■□□□□ 0.34
NUP50-202ENST00000396096 RBBP8Q99708 897 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 THAP1Q9NVV9 213 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 TXNDC16Q9P2K2 825 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 ARHGAP42A6NI28 874 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 FGF10O15520 208 aaPredicted RBP17.16■□□□□ 0.34
NUP50-202ENST00000396096 ITGB1P05556 798 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 CCNCP24863 283 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 PRPSAP1Q14558 356 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 FASTKD1Q53R41 847 aaKnown RBP17.16■□□□□ 0.34
NUP50-202ENST00000396096 ARTNQ5T4W7 220 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 N4BP2L1Q5TBK1 243 aaPredicted RBP17.16■□□□□ 0.34
NUP50-202ENST00000396096 MBLAC2Q68D91 279 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 CES3Q6UWW8 571 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 CRLF3Q8IUI8 442 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 SPATA2LQ8IUW3 424 aaPredicted RBP17.16■□□□□ 0.34
NUP50-202ENST00000396096 SCAMP5Q8TAC9 235 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 NSL1Q96IY1 281 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 SIKE1Q9BRV8 207 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 IL22Q9GZX6 179 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 ARL8BQ9NVJ2 186 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 SOX13Q9UN79 622 aa17.16■□□□□ 0.34
NUP50-202ENST00000396096 PLXNA3P51805 1871 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 MYO16Q9Y6X6 1858 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 USP12O75317 370 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 CABYRO75952 493 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 TOP3BO95985 862 aaKnown RBP17.15■□□□□ 0.34
NUP50-202ENST00000396096 SPRP35270 261 aaPredicted RBP17.15■□□□□ 0.34
NUP50-202ENST00000396096 LIMK2P53671 638 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 SLC5A3P53794 718 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 PDE1BQ01064 536 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 ZBTB16Q05516 673 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 ITGA7Q13683 1181 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 PPP2R5DQ14738 602 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 HSF5Q4G112 596 aaPredicted RBP17.15■□□□□ 0.34
NUP50-202ENST00000396096 NAPEPLDQ6IQ20 393 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 LINC00523Q86TU6 105 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 ARHGAP12Q8IWW6 846 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 LZTR1Q8N653 840 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 DNAAF3Q8N9W5 541 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 FBXO6Q9NRD1 293 aaPredicted RBP17.15■□□□□ 0.34
NUP50-202ENST00000396096 RGS18Q9NS28 235 aa17.15■□□□□ 0.34
NUP50-202ENST00000396096 HBS1LQ9Y450 684 aaKnown RBP17.15■□□□□ 0.34
NUP50-202ENST00000396096 CCDC195A0A1B0GUA6 201 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 TMEM189-UBE2V1I3L0A0 370 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 FCHO1O14526 889 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 CCDC22O60826 627 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 EOMESO95936 686 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 JCHAINP01591 159 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 PROCP04070 461 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 PRKCGP05129 697 aa17.14■□□□□ 0.33
NUP50-202ENST00000396096 FGF3P11487 239 aaPredicted RBP17.14■□□□□ 0.33
NUP50-202ENST00000396096 EZRP15311 586 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms