RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 LRRC8BQ6P9F7 803 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 UNC93AQ86WB7 457 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 DCLK2Q8N568 766 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 LPPQ93052 612 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 MFSD3Q96ES6 412 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 FAM124BQ9H5Z6 455 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 STX18Q9P2W9 335 aaKnown RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 G3BP2Q9UN86 482 aaKnown RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 EME2A4GXA9 379 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 ATP9BO43861 1147 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 UBTFL6P0CB48 400 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 HOXC8P31273 242 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 NR2C2P49116 596 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 IDH3AP50213 366 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 RAP1GDS1P52306 607 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 LILRA4P59901 499 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 MRPS6P82932 125 aaKnown RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 TSNAXIP1Q2TAA8 658 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 SLC25A52Q3SY17 297 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 C1orf146Q5VVC0 180 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 NAIF1Q69YI7 327 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 PAXIP1Q6ZW49 1069 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 B3GALNT2Q8NCR0 500 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 MAPK15Q8TD08 544 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 ATP2A3Q93084 1043 aa13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 ZNF669Q96BR6 464 aaPredicted RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 CPSF2Q9P2I0 782 aaKnown RBP13.81□□□□□ -0.2
GTF2F1-201ENST00000394456 YJEFN3A6XGL0 299 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 HUS1O60921 280 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 SIN3BO75182 1162 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 TM7SF2O76062 418 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 ANPEPP15144 967 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 TYK2P29597 1187 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 SERPINB9P50453 376 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 XKR4Q5GH76 650 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 FAM91A1Q658Y4 838 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 TIFABQ6ZNK6 161 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 PNPLA1Q8N8W4 532 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 PIWIL2Q8TC59 973 aaKnown RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 TUBB6Q9BUF5 446 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 SNX15Q9NRS6 342 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 ABT1Q9ULW3 272 aaKnown RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 ST3GAL5Q9UNP4 418 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 ARHGAP42A6NI28 874 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 ZNF195O14628 629 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 BIRC5O15392 142 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 ZBTB24O43167 697 aaPredicted RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 XPOTO43592 962 aaKnown RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 LMNAP02545 664 aaKnown RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 LTFP02788 710 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 SERPINA6P08185 405 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 CYBAP13498 195 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 SAT1P21673 171 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 HSP90AA5PQ58FG0 334 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 RAPH1Q70E73 1250 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 TRIM42Q8IWZ5 723 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 EDEM1Q92611 657 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 PPP1R12CQ9BZL4 782 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 GDAP2Q9NXN4 497 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 GTF2IRD1Q9UHL9 959 aa13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 RPL26L1Q9UNX3 145 aaKnown RBP13.8□□□□□ -0.2
GTF2F1-201ENST00000394456 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 M0QZ92 97 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ZFXP17010 805 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ERCC2P18074 760 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 PGAM1P18669 254 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 NCF2P19878 526 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 CD68P34810 354 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 FLT3LGP49771 235 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ZBTB17Q13105 803 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 SV2CQ496J9 727 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ZDHHC17Q8IUH5 632 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ZNF781Q8N8C0 355 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 CERS2Q96G23 380 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 GAD1Q99259 594 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ULBP1Q9BZM6 244 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 GOLGA8QA0A0J9YX86 632 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 GOLGA8OA6NCC3 632 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 E9PBE3 544 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 GOLGA8NF8WBI6 632 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 EEF2KO00418 725 aaKnown RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 ZBTB14O43829 449 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 KIF1CO43896 1103 aaKnown RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 KLHL41O60662 606 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 MAGEC1O60732 1142 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 GSTA2P09210 222 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 PTPN3P26045 913 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 PNPLA4P41247 253 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 RPL34P49207 117 aaKnown RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 KLC1Q07866 573 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 DPYSQ14117 519 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 SLC9B1Q4ZJI4 515 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 FOXB2Q5VYV0 432 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms