RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GMPPBQ9Y5P6 360 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 NUAK1O60285 661 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 STRIP1Q5VSL9 837 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 ELOA2Q8IYF1 753 aaPredicted RBP13.64□□□□□ -0.23
USP49-203ENST00000394253 MCFD2Q8NI22 146 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 TEX47Q8TBZ9 253 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 FATE1Q969F0 183 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 OSBPL3Q9H4L5 887 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 PCDH18Q9HCL0 1135 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 SPAG4Q9NPE6 437 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 ARMCX1Q9P291 453 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 VANGL2Q9ULK5 521 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 CRYL1Q9Y2S2 319 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 OTOFQ9HC10 1997 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 H7C2Y5 167 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 BMP7P18075 431 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 ETFBP38117 255 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 FAM171BQ6P995 826 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 EPS8L3Q8TE67 593 aaKnown RBP13.64□□□□□ -0.23
USP49-203ENST00000394253 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
USP49-203ENST00000394253 ACOT9Q9Y305 439 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 USP27XA6NNY8 438 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 MED24O75448 989 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 GLP2RO95838 553 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 MAGEA6P43360 314 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 PDIA6Q15084 440 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 LCN1P1Q5VSP4 162 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 GALNT6Q8NCL4 622 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 CDK5RAP1Q96SZ6 601 aaKnown RBP13.64□□□□□ -0.23
USP49-203ENST00000394253 MLH3Q9UHC1 1453 aa13.64□□□□□ -0.23
USP49-203ENST00000394253 NPC1L1Q9UHC9 1359 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 RTTNQ86VV8 2226 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 PMPCBO75439 489 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ZNF180Q9UJW8 692 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 DOCK9Q9BZ29 2069 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ARL5CA6NH57 179 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 CST8O60676 142 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ZNF12P17014 697 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ECHS1P30084 290 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ZNF248Q8NDW4 579 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 MAGEC3Q8TD91 643 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 KCTD4Q8WVF5 259 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 TMCO6Q96DC7 493 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 MAGEB10Q96LZ2 347 aaPredicted RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 TUBGCP5Q96RT8 1024 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 HOXC10Q9NYD6 342 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 TADA2AO75478 443 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 LRIG2O94898 1065 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 KDM4BO94953 1096 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 FGFR3P22607 806 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 TDRPQ86YL5 185 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 OFCC1Q8IZS5 231 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ZCCHC2Q9C0B9 1178 aaKnown RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 SERPINE1P05121 402 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 GARTP22102 1010 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 HTRA1Q92743 480 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ZNF341Q9BYN7 854 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 KRT33AO76009 404 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 CYP21A2P08686 494 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 GSTT2BP0CG30 244 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 NR2F6P10588 404 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 CYP4F2P78329 520 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 PPP2R2BQ00005 443 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 CYP4F3Q08477 520 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 SMU1Q2TAY7 513 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ABCB11O95342 1321 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 SEC16AO15027 2179 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 GEMP55040 296 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 KYAT3Q6YP21 454 aaKnown RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 FMR1NBQ8N0W7 255 aaPredicted RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 FAR1Q8WVX9 515 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 UCHL3P15374 230 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ACAT1P24752 427 aaKnown RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 HOXC9P31274 260 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 MECP2P51608 486 aaKnown RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 LMBRD2Q68DH5 695 aaPredicted RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 CNSTQ6PJW8 725 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ZNF589Q86UQ0 364 aaPredicted RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 EDC3Q96F86 508 aaKnown RBP13.63□□□□□ -0.23
USP49-203ENST00000394253 WRNIP1Q96S55 665 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 ALG5Q9Y673 324 aa13.63□□□□□ -0.23
USP49-203ENST00000394253 DBTP11182 482 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 CPA3P15088 417 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 EYA1Q99502 592 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 ZSWIM5Q9P217 1185 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 N6AMT1Q9Y5N5 214 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 RBM34P42696 430 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 RPP38P78345 283 aaKnown RBP13.62□□□□□ -0.23
USP49-203ENST00000394253 PDK3Q15120 406 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 BOLA3Q53S33 107 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 ATCAYQ86WG3 371 aa13.62□□□□□ -0.23
USP49-203ENST00000394253 INTS7Q9NVH2 962 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms