RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CUL3Q13618 768 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 FRG1Q14331 258 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 C11orf91Q3C1V1 193 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 SFT2D3Q587I9 215 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 FSCBQ5H9T9 825 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 ACAD11Q709F0 780 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 LIMS2Q7Z4I7 341 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 TMEM135Q86UB9 458 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 AZIN2Q96A70 460 aa19.27■□□□□ 0.68
CBX1-202ENST00000393408 CCDC124Q96CT7 223 aaKnown RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 KLHL8Q9P2G9 620 aaPredicted RBP19.27■□□□□ 0.68
CBX1-202ENST00000393408 UTRNP46939 3433 aa19.27■□□□□ 0.67
CBX1-202ENST00000393408 ZCWPW2A0A1B0GU75 182 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.26■□□□□ 0.67
CBX1-202ENST00000393408 M0QYT0 321 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 USP12O75317 370 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 HSPA4LO95757 839 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 AP2A1O95782 977 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 MPOP05164 745 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 AKAP5P24588 427 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 PTPN3P26045 913 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 SLC9B1Q4ZJI4 515 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 NOTUMQ6P988 496 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 HPS6Q86YV9 775 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 MFN1Q8IWA4 741 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 FBXW8Q8N3Y1 598 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 APPL2Q8NEU8 664 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 ZFAND2BQ8WV99 257 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 DCPSQ96C86 337 aaKnown RBP19.26■□□□□ 0.67
CBX1-202ENST00000393408 ZNF560Q96MR9 790 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 AGAP2Q99490 1192 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 CDHR5Q9HBB8 845 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 VANGL2Q9ULK5 521 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 SCN4AP35499 1836 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 A0A096LPK6 155 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.26■□□□□ 0.67
CBX1-202ENST00000393408 TMEM114B3SHH9 223 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 ZMPSTE24O75844 475 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 CD4P01730 458 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 F7P08709 466 aaPredicted RBP19.26■□□□□ 0.67
CBX1-202ENST00000393408 TBL3Q12788 808 aaKnown RBP19.26■□□□□ 0.67
CBX1-202ENST00000393408 KLF10Q13118 480 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 MSLNQ13421 630 aaPredicted RBP19.26■□□□□ 0.67
CBX1-202ENST00000393408 LPCAT4Q643R3 524 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 MAPK15Q8TD08 544 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 AGAP3Q96P47 875 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 DUSP16Q9BY84 665 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 KLHL4Q9C0H6 718 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 KATNBL1Q9H079 304 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 VCX3BQ9H321 246 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 MAN1C1Q9NR34 630 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 ARHGAP26Q9UNA1 814 aa19.26■□□□□ 0.67
CBX1-202ENST00000393408 NUMBP49757 651 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 IRF9Q00978 393 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 NME3Q13232 169 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 CFAP157Q5JU67 520 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 SYPL2Q5VXT5 272 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 HNRNPABQ99729 332 aaKnown RBP19.25■□□□□ 0.67
CBX1-202ENST00000393408 FAM49AQ9H0Q0 323 aaPredicted RBP19.25■□□□□ 0.67
CBX1-202ENST00000393408 CAB39LQ9H9S4 337 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 CASS4Q9NQ75 786 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 PIGVQ9NUD9 493 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 BFARQ9NZS9 450 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 STAP1Q9ULZ2 295 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 SMIM28A0A1B0GU29 152 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 E9PBE3 544 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 KLHL41O60662 606 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 GPR32O75388 356 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 MTTPP55157 894 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 XIAPP98170 497 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 DLG2Q15700 870 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 LRRC36Q1X8D7 754 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 ANKRD20A4Q4UJ75 823 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 METTL21CQ5VZV1 264 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 FASTKD5Q7L8L6 764 aaKnown RBP19.25■□□□□ 0.67
CBX1-202ENST00000393408 OSTM1Q86WC4 334 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 EFCAB3Q8N7B9 438 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 B3GALNT2Q8NCR0 500 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 WNT8BQ93098 351 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 TNIP3Q96KP6 325 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 SLC2A13Q96QE2 648 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 RTKNQ9BST9 563 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 SETD4Q9NVD3 440 aa19.25■□□□□ 0.67
CBX1-202ENST00000393408 DICER1Q9UPY3 1922 aaKnown RBP19.25■□□□□ 0.67
CBX1-202ENST00000393408 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.24■□□□□ 0.67
CBX1-202ENST00000393408 FAM72CH0Y354 149 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 CAPN15O75808 1086 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 BEST1O76090 585 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 PEX2P28328 305 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 PNPLA4P41247 253 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 NDUFV1P49821 464 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 TAF6P49848 677 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 TCHHL1Q5QJ38 904 aaPredicted RBP19.24■□□□□ 0.67
CBX1-202ENST00000393408 FAM72AQ5TYM5 149 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 KCTD11Q693B1 232 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 FAM72DQ6L9T8 149 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 FAM72BQ86X60 149 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 URGCPQ8TCY9 931 aa19.24■□□□□ 0.67
CBX1-202ENST00000393408 DNAI2Q9GZS0 605 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms