RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 NDUFAB1O14561 156 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 TEX28O15482 410 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 ABLIM3O94929 683 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 RTN3O95197 1032 aaPredicted RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 LINC00271P0C7V0 271 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 IRF1P10914 325 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 LSP1P33241 339 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 IFNAR2P48551 515 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 C6orf89Q6UWU4 347 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 TMEM199Q8N511 208 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 DPF3Q92784 378 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 TBC1D31Q96DN5 1066 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 SLC22A12Q96S37 553 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 MLPHQ9BV36 600 aaPredicted RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 TMEM106CQ9BVX2 250 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 EPN3Q9H201 632 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 GOLGA8RI6L899 631 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 GJB3O75712 270 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 MT-CYBP00156 380 aaPredicted RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 AGTP01019 485 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 ZDHHC11BP0C7U3 371 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 TPH1P17752 444 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 MGAT1P26572 445 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 MMP13P45452 471 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 PAPOLAP51003 745 aaKnown RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 RPL10AP62906 217 aaKnown RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 TWF1Q12792 350 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 STAT4Q14765 748 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 BZW1Q7L1Q6 419 aaKnown RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 OR52K1Q8NGK4 314 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 KLHL5Q96PQ7 755 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
MKS1-202ENST00000393119 KCNK9Q9NPC2 374 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 SMPD4Q9NXE4 827 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 SPG21Q9NZD8 308 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 YIPF1Q9Y548 306 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 BACE2Q9Y5Z0 518 aa15.33■□□□□ 0.04
MKS1-202ENST00000393119 MYO7AQ13402 2215 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 ZNF840PA6NDX5 716 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 J3KR12 359 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 COCHO43405 550 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 MAFKO60675 156 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 ABHD2P08910 425 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 SLC6A4P31645 630 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 PREPLQ4J6C6 727 aaPredicted RBP15.32■□□□□ 0.04
MKS1-202ENST00000393119 WLSQ5T9L3 541 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 UNC5AQ6ZN44 842 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 ATP11CQ8NB49 1132 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
MKS1-202ENST00000393119 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 ZC3H7BQ9UGR2 993 aaKnown RBP15.32■□□□□ 0.04
MKS1-202ENST00000393119 AFF4Q9UHB7 1163 aaKnown RBP15.32■□□□□ 0.04
MKS1-202ENST00000393119 MCM8Q9UJA3 840 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 SHROOM3Q8TF72 1996 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 FGF18O76093 207 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 C1QAP02745 245 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 KLKB1P03952 638 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 RFC2P35250 354 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 MAGEA6P43360 314 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 SGSHP51688 502 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 ACTN3Q08043 901 aaPredicted RBP15.32■□□□□ 0.04
MKS1-202ENST00000393119 CASC4Q6P4E1 433 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 NLRP14Q86W24 1093 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 OTUD6BQ8N6M0 293 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 OR52K2Q8NGK3 314 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 HDAC11Q96DB2 347 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 TTC25Q96NG3 672 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 PAFAH2Q99487 392 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 TRIM62Q9BVG3 475 aa15.32■□□□□ 0.04
MKS1-202ENST00000393119 ZNF334Q9HCZ1 680 aaPredicted RBP15.32■□□□□ 0.04
MKS1-202ENST00000393119 TMEM120BA0PK00 339 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 PRRG1O14668 218 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 CHUKO15111 745 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 OPHN1O60890 802 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 ARHGEF15O94989 841 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 GJA1P17302 382 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 MAGEA3P43357 314 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 ZXDBP98169 803 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 TRIP4Q15650 581 aaPredicted RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 TEX44Q53QW1 395 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 TMEM150AQ86TG1 271 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 KLHL23Q8NBE8 558 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 HMCESQ96FZ2 354 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 NACA2Q9H009 215 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 IL23AQ9NPF7 189 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 SYBUQ9NX95 663 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 SPTBN5Q9NRC6 3674 aaKnown RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 PDE4DIPQ5VU43 2346 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 RASA4BC9J798 803 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 RASA4O43374 803 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 CDH16O75309 829 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 TCEA3O75764 348 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 URODP06132 367 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 CNPP09543 421 aaKnown RBP15.31■□□□□ 0.04
MKS1-202ENST00000393119 BRAFP15056 766 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 MYOGP15173 224 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 HOXC13P31276 330 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 MAXP61244 160 aa15.31■□□□□ 0.04
MKS1-202ENST00000393119 PARP6Q2NL67 630 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms