RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ARHGEF2Q92974 986 aaKnown RBP11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 SIGLEC10Q96LC7 697 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 SLC39A8Q9C0K1 460 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZBP1Q9H171 429 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 RXFP1Q9HBX9 757 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 NDFIP2Q9NV92 336 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 TMEM248Q9NWD8 314 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 PCDH10Q9P2E7 1040 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 PRKAG2Q9UGJ0 569 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 SSX2IPQ9Y2D8 614 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 PLXNA4Q9HCM2 1894 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 LAMA3Q16787 3333 aa11.73□□□□□ -0.53
SMARCAL1-203ENST00000392128 ERI2A8K979 691 aaKnown RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 FGF18O76093 207 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 PPP3CCP48454 512 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 NDST2P52849 883 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 GUCY1A3Q02108 690 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 NR1H3Q13133 447 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 HECTD3Q5T447 861 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 FIBCD1Q8N539 461 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 MAML1Q92585 1016 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 CLP1Q92989 425 aaKnown RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 TEKT5Q96M29 485 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 GORASP1Q9BQQ3 440 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 DHRS4Q9BTZ2 278 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 TRPM5Q9NZQ8 1165 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZC3H7BQ9UGR2 993 aaKnown RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 RSPH14Q9UHP6 348 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 ACTL7BQ9Y614 415 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 OBSL1O75147 1896 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 DRGXA6NNA5 263 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 POC1B-GALNT4F8VUJ3 575 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 PRRG1O14668 218 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 ZBTB24O43167 697 aaPredicted RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 MAFKO60675 156 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 SUN1O94901 812 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 CPP00450 1065 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 HMBSP08397 361 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 CTSAP10619 480 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 DNAJB2P25686 324 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 ELF1P32519 619 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 CD68P34810 354 aaPredicted RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 GRIA1P42261 906 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 TIGD7Q6NT04 549 aaPredicted RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 FBXL22Q6P050 247 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 ARHGAP36Q6ZRI8 547 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 AUTS2Q8WXX7 1259 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 BADQ92934 168 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 XPO6Q96QU8 1125 aaKnown RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 CYTH2Q99418 400 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 EBNA1BP2Q99848 306 aaKnown RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 PSMC3IPQ9P2W1 217 aaPredicted RBP11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 INSL6Q9Y581 213 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 INSL5Q9Y5Q6 135 aa11.72□□□□□ -0.53
SMARCAL1-203ENST00000392128 TCRBV9S1A1TA0A576 114 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 MATN3O15232 486 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 TEX28O15482 410 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 CACNG3O60359 315 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 AP2A1O95782 977 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 STX2P32856 288 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 TWF1Q12792 350 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 TAF12Q16514 161 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 RAP1GAP2Q684P5 730 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 KCTD11Q693B1 232 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 KLHDC8BQ8IXV7 354 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 FATE1Q969F0 183 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 AGAP3Q96P47 875 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 IL12RB2Q99665 862 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 NOL6Q9H6R4 1146 aaKnown RBP11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 UXTQ9UBK9 157 aaPredicted RBP11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 TBK1Q9UHD2 729 aa11.71□□□□□ -0.53
SMARCAL1-203ENST00000392128 SRRM3A6NNA2 597 aaPredicted RBP11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 F5H423 210 aaPredicted RBP11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 TRDMT1O14717 391 aaKnown RBP11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 COCHO43405 550 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 JCHAINP01591 159 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 CCNB1P14635 433 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 EN2P19622 333 aaPredicted RBP11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 EPHB3P54753 998 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 PLD1Q13393 1074 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 TMED2Q15363 201 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 C5orf22Q49AR2 442 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 ALFQ53S48 1182 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 TTC19Q6DKK2 380 aaPredicted RBP11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 NADSYN1Q6IA69 706 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 PSRC1Q6PGN9 363 aaPredicted RBP11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 ADGRD1Q6QNK2 874 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 IGSF8Q969P0 613 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 PSMG2Q969U7 264 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 CENPTQ96BT3 561 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 PLD4Q96BZ4 506 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 CFAP36Q96G28 342 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 SELENOSQ9BQE4 189 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 NACA2Q9H009 215 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 PLAC1Q9HBJ0 212 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZNF212Q9UDV6 495 aa11.71□□□□□ -0.54
SMARCAL1-203ENST00000392128 ARHGAP42A6NI28 874 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 SDR42E2A6NKP2 422 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms