RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 C2CD2LO14523 706 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 PTSQ03393 145 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 MLXQ9UH92 298 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 OR6B1O95007 311 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 AP1S2P56377 157 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 FAAP100Q0VG06 881 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 DEPDC4Q8N2C3 294 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 SLC20A1Q8WUM9 679 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 SLC5A5Q92911 643 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 SNRPB2P08579 225 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ANTXR2P58335 489 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 BNIP2Q12982 314 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ZSWIM2Q8NEG5 633 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 TCF12Q99081 682 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 CLPBQ9H078 707 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ARMC7Q9H6L4 198 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 IDH2P48735 452 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 IST1P53990 364 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 COPZ1P61923 177 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 OLR1P78380 273 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ZNF543Q08ER8 600 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 SYTL5Q8TDW5 730 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 SP140LQ9H930 580 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 C17orf75Q9HAS0 396 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 MTF2Q9Y483 593 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 PCM1Q15154 2024 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 CRTAMO95727 393 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 GRK4P32298 578 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 USP46P62068 366 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 AUHQ13825 339 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 GALNT15Q8N3T1 639 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 DAGLBQ8NCG7 672 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 TSPAN18Q96SJ8 248 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 ACOX2Q99424 681 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 POMKQ9H5K3 350 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 PDGFCQ9NRA1 345 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 MCUBQ9NWR8 336 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 KLHL28Q9NXS3 571 aa12.63□□□□□ -0.39
SRGAP3-202ENST00000383836 A0A1W2PQ72 361 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 TRIM38O00635 465 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 NUDT17P0C025 328 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PCNAP12004 261 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 CD151P48509 253 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 SYNDIG1Q9H7V2 258 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 EMC3Q9P0I2 261 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 SSR3Q9UNL2 185 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 KPNA5O15131 536 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 CYP4F2P78329 520 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 FOXO4P98177 505 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 IL18R1Q13478 541 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PROSER1Q86XN7 944 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 RP9Q8TA86 221 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 ETNPPLQ8TBG4 499 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 FKBP14Q9NWM8 211 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 SPEF1Q9Y4P9 236 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 MIA3Q5JRA6 1907 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 TPP1O14773 563 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 ATF7IP2Q5U623 682 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PHF11Q9UIL8 331 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PCDHGC5Q9Y5F6 944 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 H3BMM5 538 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 EPN2O95208 641 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 FDX1P10109 184 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 RARAP10276 462 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 MEA1Q16626 185 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PQLC1Q8N2U9 271 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 FBXO39Q8N4B4 442 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 SH2D3AQ9BRG2 576 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 GSDMCQ9BYG8 508 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 DHRS12A0PJE2 317 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 M0QYT0 321 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 ABHD2P08910 425 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 EGFL6Q8IUX8 553 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 SLC2A3P11169 496 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 HNMTP50135 292 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 ARF5P84085 180 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 ARHGAP36Q6ZRI8 547 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PCDH20Q8N6Y1 951 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PJA1Q8NG27 643 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 POP5Q969H6 163 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
SRGAP3-202ENST00000383836 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 APBA3O96018 575 aa12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 DHFRP00374 187 aa12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 EPB42P16452 691 aa12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 GUCA1AP43080 201 aaPredicted RBP12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 C1QBPQ07021 282 aaKnown RBP12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 SLC25A13Q9UJS0 675 aa12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 SNX7Q9UNH6 387 aa12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 COQ6Q9Y2Z9 468 aa12.61□□□□□ -0.39
SRGAP3-202ENST00000383836 CCNE2O96020 404 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms