RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 NAPEPLDQ6IQ20 393 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 NLRP14Q86W24 1093 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 SLC26A11Q86WA9 606 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 ARHGAP12Q8IWW6 846 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 TCEAL8Q8IYN2 117 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 TTC9BQ8N6N2 239 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 DNAJC5GQ8N7S2 189 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 PDCD7Q8N8D1 485 aaKnown RBP13.9□□□□□ -0.18
SEC13-203ENST00000383801 SLC44A1Q8WWI5 657 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 TRIM43Q96BQ3 446 aaPredicted RBP13.9□□□□□ -0.18
SEC13-203ENST00000383801 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 FCRL5Q96RD9 977 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 SMC6Q96SB8 1091 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 PAFAH2Q99487 392 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 SELENOSQ9BQE4 189 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 VN1R3Q9BXE9 311 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 LRRC40Q9H9A6 602 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 PRDM10Q9NQV6 1147 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 NKIRAS1Q9NYS0 192 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 TRPM5Q9NZQ8 1165 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 SEPT10Q9P0V9 454 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 RSPH14Q9UHP6 348 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 ASB3Q9Y575 518 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 PCDHB12Q9Y5F1 795 aa13.9□□□□□ -0.18
SEC13-203ENST00000383801 ARHGAP42A6NI28 874 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 MAFKO60675 156 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 INHBAP08476 426 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 HSPA8P11142 646 aaKnown RBP13.89□□□□□ -0.19
SEC13-203ENST00000383801 CCNB1P14635 433 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PGAM1P18669 254 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 KRT15P19012 456 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PSMB4P28070 264 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 ELF1P32519 619 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PBX3P40426 434 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 SERPINB9P50453 376 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 DNAJC3Q13217 504 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PPIGQ13427 754 aaKnown RBP eCLIP13.89□□□□□ -0.19
SEC13-203ENST00000383801 PABPC1LQ4VXU2 614 aaKnown RBP13.89□□□□□ -0.19
SEC13-203ENST00000383801 HP1BP3Q5SSJ5 553 aaPredicted RBP13.89□□□□□ -0.19
SEC13-203ENST00000383801 HECTD3Q5T447 861 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PIK3R6Q5UE93 754 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 RTL10Q7L3V2 364 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 CDKL2Q92772 493 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PLD4Q96BZ4 506 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 STAMBPL1Q96FJ0 436 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 PRMT1Q99873 361 aaKnown RBP13.89□□□□□ -0.19
SEC13-203ENST00000383801 RXFP1Q9HBX9 757 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 MRPL17Q9NRX2 175 aaKnown RBP13.89□□□□□ -0.19
SEC13-203ENST00000383801 HAUS2Q9NVX0 235 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 MOCS1Q9NZB8 636 aa13.89□□□□□ -0.19
SEC13-203ENST00000383801 SLC12A8A0AV02 714 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 TMEM120BA0PK00 339 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 ZNF840PA6NDX5 716 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 FAM47DPA6NHR8 397 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 KCNK1O00180 336 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 ZBTB24O43167 697 aaPredicted RBP13.88□□□□□ -0.19
SEC13-203ENST00000383801 AVILO75366 819 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 KRT37O76014 449 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 LATS1O95835 1130 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 C1RP00736 705 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 POLBP06746 335 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 SLC11A2P49281 568 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 HARS2P49590 506 aaKnown RBP13.88□□□□□ -0.19
SEC13-203ENST00000383801 RENBPP51606 427 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 HTRA4P83105 476 aaPredicted RBP13.88□□□□□ -0.19
SEC13-203ENST00000383801 TMED2Q15363 201 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 PARP15Q460N3 678 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 FAXCQ5TGI0 409 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 ITIH5Q86UX2 942 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 IGDCC3Q8IVU1 814 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 CYP4X1Q8N118 509 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 TAB3Q8N5C8 712 aaPredicted RBP13.88□□□□□ -0.19
SEC13-203ENST00000383801 DCAKDQ8WVC6 231 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
SEC13-203ENST00000383801 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 YME1L1Q96TA2 773 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 DDX50Q9BQ39 737 aaKnown RBP13.88□□□□□ -0.19
SEC13-203ENST00000383801 SLC39A8Q9C0K1 460 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 CASS4Q9NQ75 786 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 TBK1Q9UHD2 729 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 DOCK4Q8N1I0 1966 aa13.88□□□□□ -0.19
SEC13-203ENST00000383801 FAM159BA6NKW6 160 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 ADAM12O43184 909 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 LILRB3O75022 631 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 BANF1O75531 89 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 KRT38O76015 456 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 JCHAINP01591 159 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 HMGA1P17096 107 aaKnown RBP13.87□□□□□ -0.19
SEC13-203ENST00000383801 CD68P34810 354 aaPredicted RBP13.87□□□□□ -0.19
SEC13-203ENST00000383801 GEMP55040 296 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 TAF12Q16514 161 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 KBTBD12Q3ZCT8 623 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 SPANXN3Q5MJ09 141 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 TMCO4Q5TGY1 634 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
SEC13-203ENST00000383801 UNC5AQ6ZN44 842 aa13.87□□□□□ -0.19
SEC13-203ENST00000383801 SRRM1Q8IYB3 904 aaKnown RBP13.87□□□□□ -0.19
SEC13-203ENST00000383801 GIPC2Q8TF65 315 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms