RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 PTPRN2Q92932 1015 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 NOX5Q96PH1 765 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 FAM129BQ96TA1 746 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 ASNSD1Q9NWL6 643 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 DDIT4Q9NX09 232 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 APEX2Q9UBZ4 518 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 RWDD2AQ9UIY3 292 aa27.25■■□□□ 1.95
NPHP3-202ENST00000383282 SYNJ2BP-COX16A0A087WUM0 186 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 GADD45BO75293 160 aaPredicted RBP27.24■■□□□ 1.95
NPHP3-202ENST00000383282 IL1BP01584 269 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 CCR5P51681 352 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 PITX1P78337 314 aaPredicted RBP27.24■■□□□ 1.95
NPHP3-202ENST00000383282 MTA1Q13330 715 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 EIF4EBP2Q13542 120 aaPredicted RBP27.24■■□□□ 1.95
NPHP3-202ENST00000383282 DEFB106AQ8N104 65 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 OR14C36Q8NHC7 312 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 PPP1R13BQ96KQ4 1090 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 COX16Q9P0S2 106 aa27.24■■□□□ 1.95
NPHP3-202ENST00000383282 KNL1Q8NG31 2342 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 A0A1B0GTQ1 180 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 HSF2BPO75031 334 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 SLC9A1P19634 815 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 MZF1P28698 734 aaPredicted RBP27.23■■□□□ 1.95
NPHP3-202ENST00000383282 STK19P49842 368 aaPredicted RBP27.23■■□□□ 1.95
NPHP3-202ENST00000383282 SNX16P57768 344 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 IL9RQ01113 521 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 TAF5Q15542 800 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 EXOC3L4Q17RC7 722 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 SLC45A4Q5BKX6 768 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 CIR1Q86X95 450 aaPredicted RBP27.23■■□□□ 1.95
NPHP3-202ENST00000383282 RPRD1AQ96P16 312 aaPredicted RBP27.23■■□□□ 1.95
NPHP3-202ENST00000383282 SLC2A13Q96QE2 648 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 CPXM1Q96SM3 734 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 ELF4Q99607 663 aaPredicted RBP27.23■■□□□ 1.95
NPHP3-202ENST00000383282 PRMT1Q99873 361 aaKnown RBP27.23■■□□□ 1.95
NPHP3-202ENST00000383282 FTSJ1Q9UET6 329 aa27.23■■□□□ 1.95
NPHP3-202ENST00000383282 BECN2A8MW95 431 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 CD38P28907 300 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 ADPRHP54922 357 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 DSG4Q86SJ6 1040 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 AADATQ8N5Z0 425 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 SPAG5Q96R06 1193 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 SLC25A13Q9UJS0 675 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 PCDHGC3Q9UN70 934 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 FREM2Q5SZK8 3169 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 DMXL2Q8TDJ6 3036 aa27.22■■□□□ 1.95
NPHP3-202ENST00000383282 CABIN1Q9Y6J0 2220 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 YKT6O15498 198 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 PLK1P53350 603 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 PTK2Q05397 1052 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 SMYD5Q6GMV2 418 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 OR6B2Q6IFH4 312 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 FBXL22Q6P050 247 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 C11orf57Q6ZUT1 292 aaPredicted RBP27.21■■□□□ 1.95
NPHP3-202ENST00000383282 PASD1Q8IV76 773 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 MDM1Q8TC05 714 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 SHC3Q92529 594 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 EBF2Q9HAK2 575 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 GDF3Q9NR23 364 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 KIAA1468Q9P260 1216 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 PKD1L2Q7Z442 2459 aa27.21■■□□□ 1.95
NPHP3-202ENST00000383282 TBC1D3DA0A087WVF3 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3IA0A087WXS9 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3EA0A087X179 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3KA0A087X1G2 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 GTPBP10A4D1E9 387 aaKnown RBP27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3FA6NER0 549 aaPredicted RBP27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3LB9A6J9 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3HP0C7X1 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 NUMBP49757 651 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 CCDC157Q569K6 752 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3GQ6DHY5 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3CQ6IPX1 549 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 TBC1D3Q8IZP1 549 aaPredicted RBP27.2■■□□□ 1.94
NPHP3-202ENST00000383282 WDTC1Q8N5D0 677 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 OR8D1Q8WZ84 308 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 SERAC1Q96JX3 654 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 SYNCQ9H7C4 482 aa27.2■■□□□ 1.94
NPHP3-202ENST00000383282 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP27.19■■□□□ 1.94
NPHP3-202ENST00000383282 GRAP2O75791 330 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 WNT1P04628 370 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 ITGAVP06756 1048 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 KRT9P35527 623 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 NME3Q13232 169 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 ZNF177Q13360 481 aaPredicted RBP27.19■■□□□ 1.94
NPHP3-202ENST00000383282 KCNJ12Q14500 433 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 ACCSLQ4AC99 568 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 FAM46CQ5VWP2 391 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 CXorf57Q6NSI4 855 aaKnown RBP27.19■■□□□ 1.94
NPHP3-202ENST00000383282 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.19■■□□□ 1.94
NPHP3-202ENST00000383282 FAM183BPQ6ZVS7 135 aa27.19■■□□□ 1.94
NPHP3-202ENST00000383282 C1orf131Q8NDD1 294 aaKnown RBP27.19■■□□□ 1.94
NPHP3-202ENST00000383282 VAV1P15498 845 aa27.18■■□□□ 1.94
NPHP3-202ENST00000383282 MTIF2P46199 727 aaKnown RBP27.18■■□□□ 1.94
NPHP3-202ENST00000383282 ARRB1P49407 418 aaPredicted RBP27.18■■□□□ 1.94
NPHP3-202ENST00000383282 VASPP50552 380 aaPredicted RBP27.18■■□□□ 1.94
NPHP3-202ENST00000383282 CENPCQ03188 943 aa27.18■■□□□ 1.94
NPHP3-202ENST00000383282 AUHQ13825 339 aaKnown RBP27.18■■□□□ 1.94
NPHP3-202ENST00000383282 PRAMEF14Q5SWL7 426 aa27.18■■□□□ 1.94
NPHP3-202ENST00000383282 PRPF39Q86UA1 669 aaKnown RBP27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms