RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SLC4A5Q9BY07 1137 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 PDGFCQ9NRA1 345 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 FETUBQ9UGM5 382 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 EBF1Q9UH73 591 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 CIDEBQ9UHD4 219 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 SYNJ2BP-COX16A0A087WUM0 186 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 J3QRK9 145 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 SERPINE1P05121 402 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 ERVK-10P10266 1014 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 TFE3P19532 575 aaPredicted RBP14.16□□□□□ -0.14
SDC1-202ENST00000381150 EIF4BP23588 611 aaKnown RBP14.16□□□□□ -0.14
SDC1-202ENST00000381150 MTTPP55157 894 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 MAP7D1Q3KQU3 841 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 POTEHQ6S545 545 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 ADGRG6Q86SQ4 1221 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 ZBTB8OSQ8IWT0 167 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 LILRA2Q8N149 483 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 CXorf38Q8TB03 319 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 FNDC8Q8TC99 324 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 DDI1Q8WTU0 396 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 LZICQ8WZA0 190 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 FBXL8Q96CD0 374 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 SPATA33Q96N06 139 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 AGAP3Q96P47 875 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 C2orf40Q9H1Z8 148 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 POPDC2Q9HBU9 364 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 TCF7L2Q9NQB0 619 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 COX16Q9P0S2 106 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 TSC22D4Q9Y3Q8 395 aa14.16□□□□□ -0.14
SDC1-202ENST00000381150 SLC15A5A6NIM6 579 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 PDGFRAP16234 1089 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 CRHR1P34998 444 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 TMED10P49755 219 aaKnown RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 EMP3P54852 163 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 MBTD1Q05BQ5 628 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SURF1Q15526 300 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 OGFRL1Q5TC84 451 aaPredicted RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 EXOC8Q8IYI6 725 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 ANKRD13AQ8IZ07 590 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 ABHD8Q96I13 439 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SCYL1Q96KG9 808 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 ZNF518BQ9C0D4 1074 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 TSPYL2Q9H2G4 693 aaPredicted RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 COQ10BQ9H8M1 238 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 CAB39LQ9H9S4 337 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SIX4Q9UIU6 781 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 PSAT1Q9Y617 370 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SAC3D1A6NKF1 404 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SPAG6O75602 509 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 OCM2P0CE71 109 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 OCMP0CE72 109 aaPredicted RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 FGF3P11487 239 aaPredicted RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 CKMT2P17540 419 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 RXRGP48443 463 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 ABCE1P61221 599 aaKnown RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 MTX3Q5HYI7 312 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 ATF7IP2Q5U623 682 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 LRRC38Q5VT99 294 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SMYD5Q6GMV2 418 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 ATG14Q6ZNE5 492 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 NCCRP1Q6ZVX7 275 aaPredicted RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 NUP93Q8N1F7 819 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 CCNYL1Q8N7R7 359 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 MAPK15Q8TD08 544 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 CPXM1Q96SM3 734 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 TRNAU1APQ9NX07 287 aaKnown RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 C6orf203Q9P0P8 240 aaPredicted RBP14.15□□□□□ -0.14
SDC1-202ENST00000381150 PAK5Q9P286 719 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 CYTH4Q9UIA0 394 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 AURKCQ9UQB9 309 aa14.15□□□□□ -0.14
SDC1-202ENST00000381150 SNNO75324 88 aaPredicted RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 CPA3P15088 417 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 VARSP26640 1264 aaKnown RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 XIAPP98170 497 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 RALGDSQ12967 914 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 ADGRE1Q14246 886 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 DLG2Q15700 870 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 IL23RQ5VWK5 629 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 MBLAC2Q68D91 279 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CAND1Q86VP6 1230 aaKnown RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 FAM47BQ8NA70 645 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 TDRD5Q8NAT2 981 aaKnown RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 SMYD1Q8NB12 490 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 PDCD6IPQ8WUM4 868 aaKnown RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 LRTOMTQ8WZ04 291 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CDKL2Q92772 493 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 TBC1D23Q9NUY8 699 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CEPT1Q9Y6K0 416 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 HMX2A2RU54 273 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 M0QYV0 167 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 GPR25O00155 361 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 METTL18O95568 372 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CLIC3O95833 236 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 CHRNGP07510 517 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 ARRB2P32121 409 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 SLC26A2P50443 739 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 SLC25A11Q02978 314 aaKnown RBP14.14□□□□□ -0.15
SDC1-202ENST00000381150 EFCAB12Q6NXP0 572 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 PGM2L1Q6PCE3 622 aa14.14□□□□□ -0.15
SDC1-202ENST00000381150 NIPA2Q8N8Q9 360 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms