RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TM7SF2O76062 418 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 ESRRBO95718 433 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 RENBPP51606 427 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 GBE1Q04446 702 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 USP4Q13107 963 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 LRRC8BQ6P9F7 803 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 B4GALNT2Q8NHY0 566 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 MAML3Q96JK9 1138 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 C7orf26Q96N11 449 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 PNPOQ9NVS9 261 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 SCHIP1Q9P0W5 487 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 SLC13A4Q9UKG4 626 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 CXCL11O14625 94 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 MAN1A2O60476 641 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 FCGR1AP12314 374 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 DAB2P98082 770 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 NRF1Q16656 503 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 PPP1R26Q5T8A7 1209 aaPredicted RBP12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 SZRD1Q7Z422 152 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 ARHGAP22Q7Z5H3 698 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 DNAJB3Q8WWF6 145 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 CLPTM1LQ96KA5 538 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 TKTL2Q9H0I9 626 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 SNX15Q9NRS6 342 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 MYRFQ9Y2G1 1151 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 SLIT2O94813 1529 aa12.96□□□□□ -0.33
DNMT3A-204ENST00000380756 C2orf81A6NN90 581 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 YDJCA8MPS7 323 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 EPHA3P29320 983 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 PLD3Q8IV08 490 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 LZTR1Q8N653 840 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 TAS2R1Q9NYW7 299 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 KCNH4Q9UQ05 1017 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 CASTOR2A6NHX0 329 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 EVPLLA8MZ36 301 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 PSMD12O00232 456 aaPredicted RBP12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 CLOCKO15516 846 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.341e-6■■■□□ 16.2
DNMT3A-204ENST00000380756 APOA1P02647 267 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 ERCC2P18074 760 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 CRHR1P34998 444 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 PLPPR4Q7Z2D5 763 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 MICU2Q8IYU8 434 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 POMKQ9H5K3 350 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 SCN3BQ9NY72 215 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 OR12D3Q9UGF7 316 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 NDUFAF1Q9Y375 327 aa12.96□□□□□ -0.34
DNMT3A-204ENST00000380756 GRIA4P48058 902 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 CLK1P49759 484 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 EP400NLQ6ZTU2 488 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 SLC4A11Q8NBS3 891 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 NETO2Q8NC67 525 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 HASPINQ8TF76 798 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 P2RY11Q96G91 374 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 CINPQ9BW66 212 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 B3GNT5Q9BYG0 378 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 SEMA6AQ9H2E6 1030 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 UTP6Q9NYH9 597 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 RAP2CQ9Y3L5 183 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 FARP2O94887 1054 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 USP17L7P0C7H9 530 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 ATXN8OSP0DMR3 200 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 GTF2H3Q13889 308 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 ATP6AP1LQ52LC2 224 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 LCLAT1Q6UWP7 414 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 TFAP2DQ7Z6R9 452 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 BANPQ8N9N5 519 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 OR9Q1Q8NGQ5 310 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 PDGFCQ9NRA1 345 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 SEPT3Q9UH03 358 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 KIF13AQ9H1H9 1805 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 DPPA5A6NC42 116 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 MAGEC1O60732 1142 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 NFKB1P19838 968 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 HARS2P49590 506 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 TUBP50607 506 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 ZNF135P52742 658 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 CSE1LP55060 971 aaKnown RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 MSLNQ13421 630 aaPredicted RBP12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 HSDL1Q3SXM5 330 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 TNIP2Q8NFZ5 429 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 SEPHS2Q99611 448 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 VTA1Q9NP79 307 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 RGS18Q9NS28 235 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 MYH6P13533 1939 aa12.95□□□□□ -0.34
DNMT3A-204ENST00000380756 CILPO75339 1184 aa12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 NPR3P17342 541 aa12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 ARF4P18085 180 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 ARL2P36404 184 aa12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 RPL5P46777 297 aaKnown RBP12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 TRPC1P48995 793 aa12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 ENPEPQ07075 957 aa12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 EFEMP1Q12805 493 aa12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 OTUD3Q5T2D3 398 aaPredicted RBP12.94□□□□□ -0.34
DNMT3A-204ENST00000380756 EMC10Q5UCC4 262 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms