RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 OR2T34Q8NGX1 318 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 SHC3Q92529 594 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 PTPRN2Q92932 1015 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 PPP1R13BQ96KQ4 1090 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 SLC2A13Q96QE2 648 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 ACE2Q9BYF1 805 aaPredicted RBP17.4■□□□□ 0.38
SMN2-201ENST00000380741 DDIT4Q9NX09 232 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 COX16Q9P0S2 106 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 KIAA1468Q9P260 1216 aa17.4■□□□□ 0.38
SMN2-201ENST00000380741 GOLGA4Q13439 2230 aaKnown RBP17.4■□□□□ 0.38
SMN2-201ENST00000380741 LRRC72A6NJI9 287 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 GOLGA8CPA6NN73 597 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 C10orf142B7Z368 130 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 PCDHGA12O60330 932 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 HSF2BPO75031 334 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 GRAP2O75791 330 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 GLI1P08151 1106 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 SLC2A3P11169 496 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 VAV1P15498 845 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 MZF1P28698 734 aaPredicted RBP17.39■□□□□ 0.37
SMN2-201ENST00000380741 CCR1P32246 355 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 GRK6P43250 576 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 CDK17Q00537 523 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 SLC12A1Q13621 1099 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 KCNJ12Q14500 433 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 CAMK4Q16566 473 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 EXOC3L4Q17RC7 722 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 IRF2BP1Q8IU81 584 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 ASNSD1Q9NWL6 643 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 SLC12A6Q9UHW9 1150 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 AJAP1Q9UKB5 411 aaPredicted RBP17.39■□□□□ 0.37
SMN2-201ENST00000380741 PCDHGC3Q9UN70 934 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 ACACAQ13085 2346 aa17.39■□□□□ 0.37
SMN2-201ENST00000380741 APC2O95996 2303 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 A0A1B0GVM2 712 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 TCAF2A6NFQ2 919 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 VILLO15195 856 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 ADH1BP00325 375 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 WNT1P04628 370 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 GOT1P17174 413 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 ABCB4P21439 1286 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 C5AR1P21730 350 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 PON1P27169 355 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 ADPRHP54922 357 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 C21orf59P57076 290 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 CENPCQ03188 943 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 ELAVL3Q14576 367 aaKnown RBP17.38■□□□□ 0.37
SMN2-201ENST00000380741 EFHC1Q5JVL4 640 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 RABGAP1LQ5R372 815 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 TTC39BQ5VTQ0 682 aaPredicted RBP17.38■□□□□ 0.37
SMN2-201ENST00000380741 CXorf57Q6NSI4 855 aaKnown RBP17.38■□□□□ 0.37
SMN2-201ENST00000380741 FBXL22Q6P050 247 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 FAM183BPQ6ZVS7 135 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 SND1Q7KZF4 910 aaKnown RBP eCLIP17.38■□□□□ 0.37
SMN2-201ENST00000380741 TMPRSS7Q7RTY8 843 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 C1orf131Q8NDD1 294 aaKnown RBP17.38■□□□□ 0.37
SMN2-201ENST00000380741 OR14C36Q8NHC7 312 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 RNF34Q969K3 372 aa17.38■□□□□ 0.37
SMN2-201ENST00000380741 DOCK9Q9BZ29 2069 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 GTPBP10A4D1E9 387 aaKnown RBP17.37■□□□□ 0.37
SMN2-201ENST00000380741 TNFSF14O43557 240 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 IL1BP01584 269 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 NNMTP40261 264 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 IRAK1P51617 712 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 CCR5P51681 352 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 PLK1P53350 603 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 SULT2A1Q06520 285 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 AUHQ13825 339 aaKnown RBP17.37■□□□□ 0.37
SMN2-201ENST00000380741 PRAMEF14Q5SWL7 426 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 OR6B2Q6IFH4 312 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 OLFML1Q6UWY5 402 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 C11orf57Q6ZUT1 292 aaPredicted RBP17.37■□□□□ 0.37
SMN2-201ENST00000380741 MDM1Q8TC05 714 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 FRS2Q8WU20 508 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 RPRD1AQ96P16 312 aaPredicted RBP17.37■□□□□ 0.37
SMN2-201ENST00000380741 NOX5Q96PH1 765 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 CCDC86Q9H6F5 360 aaKnown RBP17.37■□□□□ 0.37
SMN2-201ENST00000380741 SIX2Q9NPC8 291 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 AASDHPPTQ9NRN7 309 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 VANGL2Q9ULK5 521 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 LOC400499M0QZD8 3231 aa17.37■□□□□ 0.37
SMN2-201ENST00000380741 COL5A1P20908 1838 aaPredicted RBP17.36■□□□□ 0.37
SMN2-201ENST00000380741 A0A1B0GTQ1 180 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 WNT9AO14904 365 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 DFNA5O60443 496 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 ERBB2P04626 1255 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 PNMA6AP0CW24 399 aaPredicted RBP17.36■□□□□ 0.37
SMN2-201ENST00000380741 CD38P28907 300 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 DRD3P35462 400 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 GGCXP38435 758 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 MTIF2P46199 727 aaKnown RBP17.36■□□□□ 0.37
SMN2-201ENST00000380741 METAP1P53582 386 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 PTK2Q05397 1052 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 NME3Q13232 169 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 PTPN20Q4JDL3 420 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 SLC47A2Q86VL8 602 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 MARCH9Q86YJ5 346 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 OR52K2Q8NGK3 314 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 SKA1Q96BD8 255 aa17.36■□□□□ 0.37
SMN2-201ENST00000380741 ALG14Q96F25 216 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms