RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ZSCAN5BA6NJL1 495 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MPZL2O60487 215 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ANXA9O76027 345 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ETS1P14921 441 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PVALBP20472 110 aaPredicted RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 NMT1P30419 496 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 DSG3P32926 999 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 BLMHQ13867 455 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 USP43Q70EL4 1123 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 IFNL3Q8IZI9 196 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 OR8K3Q8NH51 312 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PTCD2Q8WV60 388 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 METTL22Q9BUU2 404 aaPredicted RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 ZFYVE28Q9HCC9 887 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ANKHQ9HCJ1 492 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 TOPORSQ9NS56 1045 aaPredicted RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 ADD3Q9UEY8 706 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 POLR1DQ9Y2S0 133 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 KCNE2Q9Y6J6 123 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CLDN3O15551 220 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 SASH3O75995 380 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 GPD1P21695 349 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 UGT1A5P35504 534 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 COILP38432 576 aaPredicted RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 NFE2L1Q14494 772 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MRNIPQ6NTE8 343 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 FCGR1BQ92637 280 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 SCGB3A2Q96PL1 93 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 TJP2Q9UDY2 1190 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 STK36Q9NRP7 1315 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 IQCMA0A1B0GVH7 501 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 NARSO43776 548 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 CCR3P51677 355 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 FAXCQ5TGI0 409 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 POC1BQ8TC44 478 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ZFAND2BQ8WV99 257 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 HEXDCQ8WVB3 486 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MED15Q96RN5 788 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MGME1Q9BQP7 344 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 C11orf70Q9BRQ4 267 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MRPL9Q9BYD2 267 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 MROH7-TTC4A0A0A0MT08 1334 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 RBMXL2O75526 392 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 C9P02748 559 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 NFKB1P19838 968 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PHKA2P46019 1235 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MAPK10P53779 464 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PLEKHG4Q58EX7 1191 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 TMPRSS11AQ6ZMR5 421 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 GFM1Q96RP9 751 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 KCNF1Q9H3M0 494 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 CRYZL1O95825 349 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ERCC2P18074 760 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 SEPHS1P49903 392 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 JAK3P52333 1124 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PTPRNQ16849 979 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 FGD3Q5JSP0 725 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ERAP2Q6P179 960 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 SCARA5Q6ZMJ2 495 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 OR6B3Q8NGW1 331 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 EPS8L3Q8TE67 593 aaKnown RBP8.88□□□□□ -0.99
LIG3-202ENST00000378526 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.99
LIG3-202ENST00000378526 TM9SF3Q9HD45 589 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MAN1C1Q9NR34 630 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 GFOD1Q9NXC2 390 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 MAFKO60675 156 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PGRP06401 933 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CD40LGP29965 261 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 RAB5CP51148 216 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PAGE2BQ5JRK9 111 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 TTC7BQ86TV6 843 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 TIGD4Q8IY51 512 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ACTRT1Q8TDG2 376 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 C18orf8Q96DM3 657 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 LURAP1Q96LR2 239 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ABCC5O15440 1437 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 SDR42E2A6NKP2 422 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 E7ENX8 843 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 FGAP02671 866 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PSKH1P11801 424 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 ADAM8P78325 824 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 PIK3R6Q5UE93 754 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CEP97Q8IW35 865 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CDRT15Q96T59 188 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CATSPERBQ9H7T0 1116 aa8.88□□□□□ -0.99
LIG3-202ENST00000378526 CYP3A7-CYP3A51PA0A087WV96 503 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 ARL5CA6NH57 179 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 OR6C70A6NIJ9 312 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 GABBR2O75899 941 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 DNTTP04053 509 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 COX4I1P13073 169 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 CYP3A7P24462 503 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 GNA12Q03113 381 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 SQLEQ14534 574 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 MED22Q15528 200 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 ADCK2Q7Z695 626 aa8.87□□□□□ -0.99
LIG3-202ENST00000378526 TFB1MQ8WVM0 346 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms