RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TBC1D30Q9Y2I9 924 aa17.53■□□□□ 0.4
RER1-202ENST00000378512 FRYQ5TBA9 3013 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 MAP1BP46821 2468 aaKnown RBP17.52■□□□□ 0.4
RER1-202ENST00000378512 GOLGA6L19H0YKK7 550 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 CLDN11O75508 207 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 EPHX1P07099 455 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 SRPRAP08240 638 aaKnown RBP17.52■□□□□ 0.4
RER1-202ENST00000378512 KRT3P12035 628 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 GZMAP12544 262 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 PDGFRAP16234 1089 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 RFC1P35251 1148 aaPredicted RBP17.52■□□□□ 0.4
RER1-202ENST00000378512 MAPK8P45983 427 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 OXCT1P55809 520 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 RPL6Q02878 288 aaKnown RBP17.52■□□□□ 0.4
RER1-202ENST00000378512 UAP1L1Q3KQV9 507 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 LYSMD4Q5XG99 296 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 PPP1R2P3Q6NXS1 205 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 CIR1Q86X95 450 aaPredicted RBP17.52■□□□□ 0.4
RER1-202ENST00000378512 SLC41A1Q8IVJ1 513 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 MCOLN2Q8IZK6 566 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 APCDD1Q8J025 514 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 OR52K2Q8NGK3 314 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 RPRD1AQ96P16 312 aaPredicted RBP17.52■□□□□ 0.4
RER1-202ENST00000378512 HAUS4Q9H6D7 363 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 FBRSQ9HAH7 460 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 PRDM16Q9HAZ2 1276 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 ITM2CQ9NQX7 267 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 ZNF212Q9UDV6 495 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 PILRBQ9UKJ0 227 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 OR51B4Q9Y5P0 310 aa17.52■□□□□ 0.4
RER1-202ENST00000378512 PI4KAP42356 2102 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 GJB6O95452 261 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 HLA-EP13747 358 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 SDC4P31431 198 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 NOVA1P51513 510 aaKnown RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 CDH4P55283 916 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 NRG1Q02297 640 aaPredicted RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 C15orf59Q2T9L4 293 aaPredicted RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 RAB6CQ53S08 254 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 SH3PXD2AQ5TCZ1 1133 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 SFMBT2Q5VUG0 894 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 PEAR1Q5VY43 1037 aaPredicted RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 WDR59Q6PJI9 974 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 ZNF571Q7Z3V5 609 aaPredicted RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 TMPRSS6Q8IU80 811 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 SYT12Q8IV01 421 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 CCDC117Q8IWD4 279 aaPredicted RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 OR2T3Q8NH03 318 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 SYN2Q92777 582 aaPredicted RBP17.51■□□□□ 0.39
RER1-202ENST00000378512 IQCDQ96DY2 449 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 RAB6CQ9H0N0 254 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 PRSS16Q9NQE7 514 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 TMPRSS4Q9NRS4 437 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 TAS2R14Q9NYV8 317 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 ZFHX4Q86UP3 3567 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 ADAMTS9Q9P2N4 1935 aa17.51■□□□□ 0.39
RER1-202ENST00000378512 ZBTB24O43167 697 aaPredicted RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 SYNCRIPO60506 623 aaKnown RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 TOP3BO95985 862 aaKnown RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 ENGP17813 658 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 MZF1P28698 734 aaPredicted RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 GGCXP38435 758 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 HDAC4P56524 1084 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 ATP11AP98196 1134 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 ASIC2Q16515 512 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 HNRNPA1L2Q32P51 320 aaKnown RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 FNDC3BQ53EP0 1204 aaKnown RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 MANEALQ5VSG8 457 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 HGSNATQ68CP4 663 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 LRSAM1Q6UWE0 723 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 SLC36A4Q6YBV0 504 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 PHLDB2Q86SQ0 1253 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 FAM131BQ86XD5 332 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 OR2I1PQ8NGU4 316 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 FEM1AQ9BSK4 669 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 SIK2Q9H0K1 926 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 SUN2Q9UH99 717 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 EVLQ9UI08 416 aaPredicted RBP17.5■□□□□ 0.39
RER1-202ENST00000378512 ANGPTL2Q9UKU9 493 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 CAPN11Q9UMQ6 739 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 ERVW-1Q9UQF0 538 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 GON4LQ3T8J9 2241 aa17.5■□□□□ 0.39
RER1-202ENST00000378512 CNTN5O94779 1100 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 MOCS3O95396 460 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 CFIP05156 583 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 TNFAIP3P21580 790 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 RRM1P23921 792 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 ADRA1BP35368 520 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 CTSOP43234 321 aaPredicted RBP17.49■□□□□ 0.39
RER1-202ENST00000378512 ECT2LQ008S8 904 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 ALFQ53S48 1182 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 KIAA1324Q6UXG2 1013 aaKnown RBP17.49■□□□□ 0.39
RER1-202ENST00000378512 NTAN1Q96AB6 310 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 SELENOOQ9BVL4 669 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 SEPT11Q9NVA2 429 aaKnown RBP17.49■□□□□ 0.39
RER1-202ENST00000378512 WSB2Q9NYS7 404 aaPredicted RBP17.49■□□□□ 0.39
RER1-202ENST00000378512 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
RER1-202ENST00000378512 PPARGC1AQ9UBK2 798 aaKnown RBP17.49■□□□□ 0.39
RER1-202ENST00000378512 USP24Q9UPU5 2620 aa17.48■□□□□ 0.39
RER1-202ENST00000378512 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms