RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 TIMM13Q9Y5L4 95 aaPredicted RBP18.54■□□□□ 0.56
SF1-203ENST00000377387 AIM2O14862 343 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 ZBTB24O43167 697 aaPredicted RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 CHRNGP07510 517 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 AVPR1AP37288 418 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 CCNIQ14094 377 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 SFT2D3Q587I9 215 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 SLC30A9Q6PML9 568 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 USP33Q8TEY7 942 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 OR52B2Q96RD2 323 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 PLEKHA5Q9HAU0 1116 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 RNASEH1O60930 286 aaKnown RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 GRK2P25098 689 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 PEX2P28328 305 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 ACADSBP45954 432 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 TBL3Q12788 808 aaKnown RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 NOTUMQ6P988 496 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 SIX6OS1Q8N1H7 587 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 CRYBG2Q8N1P7 616 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 B3GALNT2Q8NCR0 500 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 IARS2Q9NSE4 1012 aaKnown RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 C20orf96Q9NUD7 363 aaPredicted RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 SLC39A10Q9ULF5 831 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 UBQLN1Q9UMX0 589 aaKnown RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.53■□□□□ 0.56
SF1-203ENST00000377387 ZNF487B1APH4 448 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 ZNF195O14628 629 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 NRP1O14786 923 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 SMPD1P17405 629 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 ITGAXP20702 1163 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.53■□□□□ 0.565e-7■■■■■ 28.5
SF1-203ENST00000377387 OR6J1Q8NGC5 347 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 TMEM40Q8WWA1 233 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 BFARQ9NZS9 450 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 ASB3Q9Y575 518 aa18.53■□□□□ 0.56
SF1-203ENST00000377387 PTPN3P26045 913 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 PAPOLAP51003 745 aaKnown RBP18.52■□□□□ 0.56
SF1-203ENST00000377387 TKTL1P51854 596 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 TRIP10Q15642 601 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 CYS1Q717R9 158 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 DHDDSQ86SQ9 333 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 SPATA6LQ8N4H0 392 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 RNF148Q8N7C7 305 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 DNAJB3Q8WWF6 145 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 LENG1Q96BZ8 264 aaPredicted RBP18.52■□□□□ 0.56
SF1-203ENST00000377387 CELF6Q96J87 481 aaKnown RBP18.52■□□□□ 0.56
SF1-203ENST00000377387 HSFY1Q96LI6 401 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 CPNE1Q99829 537 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 ADAMTS10Q9H324 1103 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 POMPQ9Y244 141 aa18.52■□□□□ 0.56
SF1-203ENST00000377387 I6L893 689 aaPredicted RBP18.52■□□□□ 0.55
SF1-203ENST00000377387 BUD23O43709 281 aaKnown RBP18.52■□□□□ 0.55
SF1-203ENST00000377387 C2P06681 752 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 SPRP35270 261 aaPredicted RBP18.52■□□□□ 0.55
SF1-203ENST00000377387 CDK18Q07002 472 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 PPM1LQ5SGD2 360 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 TMCO4Q5TGY1 634 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 EDEM1Q92611 657 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 CMTM5Q96DZ9 223 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 MARK4Q96L34 752 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 LENG8Q96PV6 779 aaPredicted RBP18.52■□□□□ 0.55
SF1-203ENST00000377387 RBBP8Q99708 897 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 LRRC40Q9H9A6 602 aa18.52■□□□□ 0.55
SF1-203ENST00000377387 CFLARO15519 480 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 PHGDHO43175 533 aaKnown RBP18.51■□□□□ 0.55
SF1-203ENST00000377387 FKBP6O75344 327 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
SF1-203ENST00000377387 COX4I1P13073 169 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 RAG1P15918 1043 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 MPSTP25325 297 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 EPHA3P29320 983 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 GLUD2P49448 558 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 TAF6P49848 677 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 AQP4P55087 323 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 GRAMD1BQ3KR37 738 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 PRAMEF19Q5SWL8 479 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 GRTP1Q5TC63 336 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 WSCD1Q658N2 575 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 DPP9Q86TI2 863 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 TDRD5Q8NAT2 981 aaKnown RBP18.51■□□□□ 0.55
SF1-203ENST00000377387 GDPD5Q8WTR4 605 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 KCNK16Q96T55 309 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 SORCS3Q9UPU3 1222 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 TK2O00142 265 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 PIRO00625 290 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 DYNC1LI2O43237 492 aaPredicted RBP18.51■□□□□ 0.55
SF1-203ENST00000377387 TOMM70O94826 608 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 NOS2P35228 1153 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 ANKRD20A4Q4UJ75 823 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 STXBP5Q5T5C0 1151 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 RASIP1Q5U651 963 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 ZNF410Q86VK4 478 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 PSTKQ8IV42 348 aaKnown RBP18.51■□□□□ 0.55
SF1-203ENST00000377387 NPWQ8N729 165 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 OR6Y1Q8NGX8 325 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 SCYL1Q96KG9 808 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 ULBP1Q9BZM6 244 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 DNAJC28Q9NX36 388 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 SHROOM3Q8TF72 1996 aa18.51■□□□□ 0.55
SF1-203ENST00000377387 XPO1O14980 1071 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms