RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CDK16Q00536 496 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 OCRLQ01968 901 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 SEMA3BQ13214 749 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 RASIP1Q5U651 963 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 CASC4Q6P4E1 433 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 LRRC8BQ6P9F7 803 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 PID1Q7Z2X4 250 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 UNC5BQ8IZJ1 945 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 AZIN2Q96A70 460 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 TTC17Q96AE7 1141 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 GBP5Q96PP8 586 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 FERMT1Q9BQL6 677 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 TLE6Q9H808 572 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 CSNK1G1Q9HCP0 422 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 DCTN4Q9UJW0 460 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 SNX10Q9Y5X0 201 aa14.33□□□□□ -0.12
MSH5-202ENST00000375740 DCTN3O75935 186 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 CCND3P30281 292 aaPredicted RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 SESN2P58004 480 aaPredicted RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 TPI1P60174 286 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 SCAPQ12770 1279 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 DSC3Q14574 896 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 LPIN1Q14693 890 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 PABPC1LQ4VXU2 614 aaKnown RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 FAM171BQ6P995 826 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 NLRP9Q7RTR0 991 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 METTL23Q86XA0 190 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 PGAP3Q96FM1 320 aaPredicted RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 SRPK1Q96SB4 655 aaKnown RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 ADAM2Q99965 735 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 ACBD6Q9BR61 282 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 COLEC11Q9BWP8 271 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 PREBQ9HCU5 417 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 NPHS2Q9NP85 383 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 TMLHEQ9NVH6 421 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 ARL8BQ9NVJ2 186 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 MOCS1Q9NZB8 636 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 KANSL3Q9P2N6 904 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 INPP5FQ9Y2H2 1132 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 A0A0U1RQF3 1178 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 HMX2A2RU54 273 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 MAGEA13PA6NCF6 341 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 KCNK1O00180 336 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 MGAT1P26572 445 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 TM4SF4P48230 202 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 PRKCZQ05513 592 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 OVGP1Q12889 678 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 BSPRYQ5W0U4 402 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 CLNKQ7Z7G1 428 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 DEPDC1BQ8WUY9 529 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 TMEM209Q96SK2 561 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 WDCPQ9H6R7 721 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 EIF2B3Q9NR50 452 aaKnown RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 CHCHD3Q9NX63 227 aaKnown RBP14.32□□□□□ -0.12
MSH5-202ENST00000375740 CENPFP49454 3210 aa14.32□□□□□ -0.12
MSH5-202ENST00000375740 GSC2O15499 205 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 KRT38O76015 456 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 HCAR3P49019 387 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 RASSF2P50749 326 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 SLC34A1Q06495 639 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 ARL13BQ3SXY8 428 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 INTS6LQ5JSJ4 861 aaKnown RBP14.31□□□□□ -0.12
MSH5-202ENST00000375740 MROH9Q5TGP6 573 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 TUBGCP5Q96RT8 1024 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 SLC13A1Q9BZW2 595 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
MSH5-202ENST00000375740 DMAP1Q9NPF5 467 aaPredicted RBP14.31□□□□□ -0.12
MSH5-202ENST00000375740 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.31□□□□□ -0.12
MSH5-202ENST00000375740 PSMG1O95456 288 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 F9P00740 461 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 BGNP21810 368 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 CCNFP41002 786 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 INHBCP55103 352 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 FYB2Q5VWT5 728 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 STEAP4Q687X5 459 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 PM20D1Q6GTS8 502 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 PDZD4Q76G19 769 aaPredicted RBP14.31□□□□□ -0.12
MSH5-202ENST00000375740 CHSY1Q86X52 802 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 KLHDC9Q8NEP7 349 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 SH3TC2Q8TF17 1288 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 ARNTL2Q8WYA1 636 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 TKTL2Q9H0I9 626 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 RRN3Q9NYV6 651 aa14.31□□□□□ -0.12
MSH5-202ENST00000375740 TDRD15B5MCY1 1934 aaKnown RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 CYP11A1P05108 521 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 RPLP2P05387 115 aaKnown RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 LYNP07948 512 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 PTPN3P26045 913 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 CXCR3P49682 368 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 DYNC1I2Q13409 638 aaKnown RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 CCSAPQ6IQ19 270 aaPredicted RBP14.3□□□□□ -0.12
MSH5-202ENST00000375740 CYS1Q717R9 158 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 NPWQ8N729 165 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 RFWD2Q8NHY2 731 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 PGBD4Q96DM1 585 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 MTBPQ96DY7 904 aa14.3□□□□□ -0.12
MSH5-202ENST00000375740 TSSK1BQ9BXA7 367 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms