RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 FUT11Q495W5 492 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 TMEM215Q68D42 235 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 ZNF783Q6ZMS7 281 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 ADIPOR2Q86V24 386 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 VSIG1Q86XK7 387 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 SFTPA1Q8IWL2 248 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 OR52K2Q8NGK3 314 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 KCNV2Q8TDN2 545 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 ZNF670Q9BS34 389 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 IER2Q9BTL4 223 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 C1QTNF1Q9BXJ1 281 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 LZTFL1Q9NQ48 299 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 RBM12Q9NTZ6 932 aaKnown RBP15.43■□□□□ 0.06
HSPG2-201ENST00000374673 DDX56Q9NY93 547 aaKnown RBP15.43■□□□□ 0.06
HSPG2-201ENST00000374673 DONSONQ9NYP3 566 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 DLGAP2Q9P1A6 1054 aa15.43■□□□□ 0.06
HSPG2-201ENST00000374673 INTS6Q9UL03 887 aaKnown RBP15.43■□□□□ 0.06
HSPG2-201ENST00000374673 BDP1A6H8Y1 2624 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 ILVBLA1L0T0 632 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 FAM86C2PA6NEL3 165 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 ZSCAN12O43309 604 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 TIMM44O43615 452 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 PI15O43692 258 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 RNF40O75150 1001 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 CD48P09326 243 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 ERCC2P18074 760 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 KDELR1P24390 212 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 CTNNA2P26232 953 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 MRPS21P82921 87 aaKnown RBP15.42■□□□□ 0.06
HSPG2-201ENST00000374673 DPYSL3Q14195 570 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 PITRM1Q5JRX3 1037 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 MBLAC2Q68D91 279 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 NT5DC3Q86UY8 548 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 MAP7D3Q8IWC1 876 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 KCTD6Q8NC69 237 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 USP33Q8TEY7 942 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 UCMAQ8WVF2 138 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 TTC17Q96AE7 1141 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 ALG14Q96F25 216 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 CSPG4P5Q96PW8 444 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 CHRDQ9H2X0 955 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 NDFIP2Q9NV92 336 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 KLHL11Q9NVR0 708 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 ELOVL2Q9NXB9 296 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 OR51B4Q9Y5P0 310 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 ATG2BQ96BY7 2078 aa15.42■□□□□ 0.06
HSPG2-201ENST00000374673 MYO18AQ92614 2054 aaKnown RBP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 ZNF487B1APH4 448 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 CHURC1-FNTBB4DL54 471 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 DAPK3O43293 454 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 DCNP07585 359 aaKnown RBP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 HNRNPLP14866 589 aaKnown RBP eCLIP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 IL4RP24394 825 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 MZF1P28698 734 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 CTNNA1P35221 906 aaKnown RBP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 GNA12Q03113 381 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 E2F5Q15329 346 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 HSF5Q4G112 596 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 ZFYVE27Q5T4F4 411 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 RNF219Q5W0B1 726 aaPredicted RBP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 PEX26Q7Z412 305 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 REXO1L1PQ8IX06 675 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 KATNAL2Q8IYT4 538 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 APCDD1Q8J025 514 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 UMODL1-AS1Q8N2C9 162 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 UBE2Q2Q8WVN8 375 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 RAPGEF5Q92565 580 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 FAF2Q96CS3 445 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 FEM1AQ9BSK4 669 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 MUC3BQ9H195 1237 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 AMFRQ9UKV5 643 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 HCN2Q9UL51 889 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.41■□□□□ 0.06
HSPG2-201ENST00000374673 PCDHA3Q9Y5H8 950 aa15.41■□□□□ 0.06
HSPG2-201ENST00000374673 NYNRINQ9P2P1 1898 aaKnown RBP15.4■□□□□ 0.06
HSPG2-201ENST00000374673 NUP205Q92621 2012 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 CCDC66A2RUB6 948 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 LRRD1A4D1F6 860 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 ANTXRLA6NF34 631 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 C3orf70A6NLC5 250 aaPredicted RBP15.4■□□□□ 0.06
HSPG2-201ENST00000374673 DCLK1O15075 740 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 NPC1O15118 1278 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 RAMP2O60895 175 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 KRT1P04264 644 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 ASLP04424 464 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 ATP5BP06576 529 aaKnown RBP15.4■□□□□ 0.06
HSPG2-201ENST00000374673 TNNT1P13805 278 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 POLR2EP19388 210 aaKnown RBP15.4■□□□□ 0.06
HSPG2-201ENST00000374673 AMPD1P23109 780 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 TIE1P35590 1138 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 ETFBP38117 255 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 SEC13P55735 322 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 YBEYP58557 167 aaPredicted RBP15.4■□□□□ 0.06
HSPG2-201ENST00000374673 SULT2A1Q06520 285 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 GAS6Q14393 721 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 TMEM31Q5JXX7 168 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 EMC10Q5UCC4 262 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 EGFLAMQ63HQ2 1017 aa15.4■□□□□ 0.06
HSPG2-201ENST00000374673 Q6ZS52 159 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms