RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SLC4A11Q8NBS3 891 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 ZNF347Q96SE7 839 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 FAM49BQ9NUQ9 324 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 MTRRQ9UBK8 725 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 KLHL3Q9UH77 587 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PTBP2Q9UKA9 531 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 NUDT5Q9UKK9 219 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 COG5Q9UP83 839 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 IFT52Q9Y366 437 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 A0A0B4J269 797 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 CCDC78A2IDD5 438 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 LOC110117498-PIK3R3F6TDL0 507 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 IFNA16P05015 189 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 TSHRP16473 764 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 HK2P52789 917 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 CSTF3Q12996 717 aaKnown RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 PRMT9Q6P2P2 845 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 KATNAL2Q8IYT4 538 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 EMC1Q8N766 993 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 C12orf50Q8NA57 414 aaPredicted RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 C7orf43Q8WVR3 580 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 NCSTNQ92542 709 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 LPGAT1Q92604 370 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 CEP170P1Q96L14 293 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 PKP2Q99959 881 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 ELOVL6Q9H5J4 265 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 TMEM8AQ9HCN3 771 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 UCKL1Q9NWZ5 548 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 SEPT9Q9UHD8 586 aaPredicted RBP10.44□□□□□ -0.74
CD28-202ENST00000374481 N6AMT1Q9Y5N5 214 aa10.44□□□□□ -0.74
CD28-202ENST00000374481 TPPPO94811 219 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 MAP3K6O95382 1288 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CHRNB1P11230 501 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 RPS8P62241 208 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 ITKQ08881 620 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 PPIL2Q13356 520 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 PHC2Q8IXK0 858 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 NPAS2Q99743 824 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 OR2B2Q9GZK3 357 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 DHX33Q9H6R0 707 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 SNTG2Q9NY99 539 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 MAD2L2Q9UI95 211 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CDC14AQ9UNH5 594 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 SNX8Q9Y5X2 465 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 MYH7BA7E2Y1 1941 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 H0Y858 1186 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 AGRPO00253 132 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CPNE3O75131 537 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 ALDH4A1P30038 563 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 PUDPQ08623 228 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CBWD6Q4V339 395 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CBWD3Q5JTY5 395 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CBWD5Q5RIA9 395 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 VWA5B1Q5TIE3 1220 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 ANKS1BQ7Z6G8 1248 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 THNSL1Q8IYQ7 743 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 FAM156AQ8NDB6 213 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 SHCBP1Q8NEM2 672 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 KBTBD8Q8NFY9 601 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 EPS8L1Q8TE68 723 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 TMIGD2Q96BF3 282 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 TRIM45Q9H8W5 580 aaPredicted RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 MAGEE1Q9HCI5 957 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 ACP6Q9NPH0 428 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 DYRK4Q9NR20 520 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 SMPD3Q9NY59 655 aaPredicted RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 DRG1Q9Y295 367 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 TMEM2Q9UHN6 1383 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 FAM149AA5PLN7 773 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 USP17L10C9JJH3 530 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 MED24O75448 989 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 QARSP47897 775 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 NPTX2P47972 431 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 MAPK12P53778 367 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CYP1B1Q16678 543 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 DCAF12L1Q5VU92 463 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 ZC3H7AQ8IWR0 971 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 CPXCR1Q8N123 301 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 SLC15A4Q8N697 577 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 VPS35Q96QK1 796 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 RMND5AQ9H871 391 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 BAIAP2Q9UQB8 552 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 ERGIC3Q9Y282 383 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 TMEM131LA2VDJ0 1609 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 SDR42E2A6NKP2 422 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 TNFRSF10AO00220 468 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 CYP1A1P04798 512 aaPredicted RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 IL2RBP14784 551 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 RBL1P28749 1068 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 GTF2H1P32780 548 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.43□□□□□ -0.74
CD28-202ENST00000374481 LRP8Q14114 963 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 C5orf22Q49AR2 442 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 FOXR2Q6PJQ5 311 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 SLC44A1Q8WWI5 657 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 HEXIM2Q96MH2 286 aaKnown RBP10.43□□□□□ -0.74
CD28-202ENST00000374481 GLT1D1Q96MS3 346 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 PNPLA8Q9NP80 782 aa10.43□□□□□ -0.74
CD28-202ENST00000374481 ZDHHC7Q9NXF8 308 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms