RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 HIRAP54198 1017 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 VEPH1Q14D04 833 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 KHDC1Q4VXA5 237 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 TNS4Q8IZW8 715 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 MRPS26Q9BYN8 205 aaKnown RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 WWOXQ9NZC7 414 aa17.74■□□□□ 0.43
PTPRU-202ENST00000373779 TIMM13Q9Y5L4 95 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-202ENST00000373779 SETD1AO15047 1707 aaKnown RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 PSMD12O00232 456 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 HDAC3O15379 428 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CLOCKO15516 846 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 IFNA8P32881 189 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 RPL5P46777 297 aaKnown RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CENPLQ8N0S6 344 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 C10orf82Q8WW14 230 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF512Q96ME7 567 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 S100A14Q9HCY8 104 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 INPP4BO15327 924 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 OR1G1P47890 313 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 PLK1P53350 603 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 FOLH1Q04609 750 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 SLC41A1Q8IVJ1 513 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CLPTM1LQ96KA5 538 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 HSFY1Q96LI6 401 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CDH19Q9H159 772 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 MID1IP1Q9NPA3 183 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 BTBD7Q9P203 1132 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF142P52746 1687 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CYP2B6P20813 491 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 ATP6V1B2P21281 511 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 FGFR3P22607 806 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CSE1LP55060 971 aaKnown RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 FRG1Q14331 258 aaKnown RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 TAGAPQ8N103 731 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 MIER2Q8N344 545 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 OSCP1Q8WVF1 389 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 PRDM12Q9H4Q4 367 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 RGS18Q9NS28 235 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 HARS2P49590 506 aaKnown RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF135P52742 658 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 MARC1Q5VT66 337 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 TAF2Q6P1X5 1199 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 P3H2Q8IVL5 708 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 C12orf29Q8N999 325 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 BANPQ8N9N5 519 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 ACE2Q9BYF1 805 aaPredicted RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 APOBEC3GQ9HC16 384 aaKnown RBP17.73■□□□□ 0.43
PTPRU-202ENST00000373779 CLIC5Q9NZA1 410 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 ZNF180Q9UJW8 692 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 PLA2G4CQ9UP65 541 aa17.73■□□□□ 0.43
PTPRU-202ENST00000373779 YY1P25490 414 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 LRPAP1P30533 357 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 AARS2Q5JTZ9 985 aaKnown RBP17.72■□□□□ 0.43
PTPRU-202ENST00000373779 PCID2Q5JVF3 399 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 MIB1Q86YT6 1006 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 RIOX2Q8IUF8 465 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 FBXW8Q8N3Y1 598 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 LZTR1Q8N653 840 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 ULBP1Q9BZM6 244 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 TKTL2Q9H0I9 626 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 ATXN3LQ9H3M9 355 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 DDX28Q9NUL7 540 aaKnown RBP17.72■□□□□ 0.43
PTPRU-202ENST00000373779 PRPF19Q9UMS4 504 aaKnown RBP17.72■□□□□ 0.43
PTPRU-202ENST00000373779 RAD54BQ9Y620 910 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 LGALS2P05162 132 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 UQCRBP14927 111 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 PAN2Q504Q3 1202 aaKnown RBP17.72■□□□□ 0.43
PTPRU-202ENST00000373779 KIAA2013Q8IYS2 634 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 SEPHS2Q99611 448 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 DCUN1D5Q9BTE7 237 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 C9orf16Q9BUW7 83 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 FETUBQ9UGM5 382 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 CNTNAP2Q9UHC6 1331 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 CRTAMO95727 393 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 TPSB2P20231 275 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 TPSAB1Q15661 275 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 RNF220Q5VTB9 566 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 MICU2Q8IYU8 434 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 SLC16A10Q8TF71 515 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 SMARCD1Q96GM5 515 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 PIF1Q9H611 641 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 A0A087WXM4 84 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 CD48P09326 243 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 SP100P23497 879 aaPredicted RBP17.72■□□□□ 0.43
PTPRU-202ENST00000373779 HK2P52789 917 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 GTF2H3Q13889 308 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 B4GALT4O60513 344 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 RECQL4O94761 1208 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 CSPG5O95196 566 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 SERPINB1P30740 379 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 C16orf72Q14CZ0 275 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 PLPPR4Q7Z2D5 763 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 ANKRD52Q8NB46 1076 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 RDH11Q8TC12 318 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 ZCWPW1Q9H0M4 648 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 DSEQ9UL01 958 aa17.72■□□□□ 0.43
PTPRU-202ENST00000373779 MYH6P13533 1939 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms