RNA–Protein interactions for RNA: ENST00000373608.7

COPS7B-203, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best) BASIC

Gene COPS7B, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-203ENST00000373608 RAD54BQ9Y620 910 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.09□□□□□ -0.15
COPS7B-203ENST00000373608 HMX2A2RU54 273 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 EEF2KO00418 725 aaKnown RBP14.09□□□□□ -0.15
COPS7B-203ENST00000373608 GABRDO14764 452 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 FBXO21O94952 628 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 MYL3P08590 195 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 HOXC13P31276 330 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 BST1Q10588 318 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 SIM2Q14190 667 aaPredicted RBP14.09□□□□□ -0.15
COPS7B-203ENST00000373608 MORN1Q5T089 497 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 SPRYD7Q5W111 196 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 OLFML2BQ68BL8 750 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 STKLD1Q8NE28 680 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 SUN5Q8TC36 379 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 ANKRD49Q8WVL7 239 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 NDRG1Q92597 394 aaKnown RBP14.09□□□□□ -0.15
COPS7B-203ENST00000373608 PTCD3Q96EY7 689 aaKnown RBP14.09□□□□□ -0.15
COPS7B-203ENST00000373608 TRIM56Q9BRZ2 755 aaKnown RBP14.09□□□□□ -0.15
COPS7B-203ENST00000373608 BTBD10Q9BSF8 475 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 TRIM4Q9C037 500 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 NUMBLQ9Y6R0 609 aa14.09□□□□□ -0.15
COPS7B-203ENST00000373608 CLDN5O00501 218 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 ZNF865P0CJ78 1059 aaPredicted RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 NIPAL4Q0D2K0 466 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 CHI3L2Q15782 390 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 RFX8Q6ZV50 586 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 ARRDC4Q8NCT1 418 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 CCNYQ8ND76 341 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 ATP2A3Q93084 1043 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 PPP1R10Q96QC0 940 aaKnown RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 PTPN18Q99952 460 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 MECRQ9BV79 373 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 AP5M1Q9H0R1 490 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 RNPEPL1Q9HAU8 725 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 SLC38A7Q9NVC3 462 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 IGSF9Q9P2J2 1179 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 Q9Y3F1 56 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 MYO18AQ92614 2054 aaKnown RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 SYNJ2BP-COX16A0A087WUM0 186 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 A0A0B4J203 849 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 E7ENQ6 273 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 CAPN9O14815 690 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 BEST1O76090 585 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 BPGMP07738 259 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 COL6A1P12109 1028 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 ACAT1P24752 427 aaKnown RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 CCNG1P51959 295 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 OCRLQ01968 901 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 IFRD2Q12894 506 aaPredicted RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 NME3Q13232 169 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 DPYSQ14117 519 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 FIP1L1Q6UN15 594 aaKnown RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 PAQR9Q6ZVX9 377 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 CRLF3Q8IUI8 442 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 NTAN1Q96AB6 310 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 ANKRD27Q96NW4 1050 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 IER2Q9BTL4 223 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 WWP1Q9H0M0 922 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 TUBA8Q9NY65 449 aaPredicted RBP14.08□□□□□ -0.16
COPS7B-203ENST00000373608 COX16Q9P0S2 106 aa14.08□□□□□ -0.16
COPS7B-203ENST00000373608 FAM237BA0A1B0GVD1 139 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 PTGESO14684 152 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 GLRA3O75311 464 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 LMNAP02545 664 aaKnown RBP14.07□□□□□ -0.16
COPS7B-203ENST00000373608 TKTL1P51854 596 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 DMPKQ09013 629 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 TEX44Q53QW1 395 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 MDH1BQ5I0G3 518 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 WSCD1Q658N2 575 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 TMEM86AQ8N2M4 240 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 PAF1Q8N7H5 531 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 PRDM12Q9H4Q4 367 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
COPS7B-203ENST00000373608 KRT82Q9NSB4 513 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 ARL8BQ9NVJ2 186 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 DDX43Q9NXZ2 648 aaKnown RBP14.07□□□□□ -0.16
COPS7B-203ENST00000373608 SEPT10Q9P0V9 454 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 MKL2Q9ULH7 1088 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 NR2E3Q9Y5X4 410 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 SQORQ9Y6N5 450 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 DCLK1O15075 740 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 NCAM2O15394 837 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 MGAT1P26572 445 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 PSMB4P28070 264 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 LHX1P48742 406 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 NDUFV1P49821 464 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 MAP3K7CLP57077 242 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 SESN2P58004 480 aaPredicted RBP14.07□□□□□ -0.16
COPS7B-203ENST00000373608 PITX1P78337 314 aaPredicted RBP14.07□□□□□ -0.16
COPS7B-203ENST00000373608 SCAPQ12770 1279 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 SYPL2Q5VXT5 272 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
COPS7B-203ENST00000373608 ZNF567Q8N184 647 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 ARNTL2Q8WYA1 636 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 PGBD4Q96DM1 585 aa14.07□□□□□ -0.16
COPS7B-203ENST00000373608 SIKE1Q9BRV8 207 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms