RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 SNRPAP09012 282 aaKnown RBP20.06■□□□□ 0.8
HDAC1-201ENST00000373548 PGAM1P18669 254 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 ADRA1DP25100 572 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 TUBP50607 506 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 NRG1Q02297 640 aaPredicted RBP20.06■□□□□ 0.8
HDAC1-201ENST00000373548 RGS9BPQ6ZS82 235 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 SPPL2BQ8TCT7 592 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 FBXO32Q969P5 355 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 TSGA13Q96PP4 275 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 C12orf65Q9H3J6 166 aaKnown RBP20.06■□□□□ 0.8
HDAC1-201ENST00000373548 NDFIP2Q9NV92 336 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 SLC17A7Q9P2U7 560 aa20.06■□□□□ 0.8
HDAC1-201ENST00000373548 MRPL42Q9Y6G3 142 aaKnown RBP20.06■□□□□ 0.8
HDAC1-201ENST00000373548 TM9SF1O15321 606 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 PYGBP11216 843 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 MLLT6P55198 1093 aaPredicted RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 MGAT5BQ3V5L5 792 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 PIK3R6Q5UE93 754 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CGB2Q6NT52 195 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 ANKRD33Q7Z3H0 272 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CCNJLQ8IV13 435 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CNTD1Q8N815 330 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 SPOCK2Q92563 424 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 APOPT1Q96IL0 206 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 SEPT5Q99719 369 aaPredicted RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 SLC39A8Q9C0K1 460 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 DOCK4Q8N1I0 1966 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 ARHGAP42A6NI28 874 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 ERI2A8K979 691 aaKnown RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 H7C4K7 107 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 RTN3O95197 1032 aaPredicted RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 HAPLN1P10915 354 aaPredicted RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CCNCP24863 283 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 NEK3P51956 506 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 TBX4P57082 545 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 EFEMP1Q12805 493 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CRYMQ14894 314 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 PRSS55Q6UWB4 352 aaPredicted RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CCDC121Q6ZUS5 278 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 DEFB128Q7Z7B8 93 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 LRRC43Q8N309 656 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 ATPAF2Q8N5M1 289 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 LZTR1Q8N653 840 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 C1orf74Q96LT6 269 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 NAT9Q9BTE0 207 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 TTPALQ9BTX7 342 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 CASS4Q9NQ75 786 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 MPP6Q9NZW5 540 aa20.05■□□□□ 0.8
HDAC1-201ENST00000373548 USP15Q9Y4E8 981 aaPredicted RBP20.05■□□□□ 0.8
HDAC1-201ENST00000373548 LPXNO60711 386 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 NIPAL4Q0D2K0 466 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 TAF10Q12962 218 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 DNAJC3Q13217 504 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 BMPR2Q13873 1038 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 LGSNQ5TDP6 509 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 SLC39A5Q6ZMH5 540 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 FAM47EQ6ZV65 393 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 ANKS3Q6ZW76 656 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 RTL3Q8N8U3 475 aaKnown RBP20.04■□□□□ 0.8
HDAC1-201ENST00000373548 TTC17Q96AE7 1141 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.04■□□□□ 0.8
HDAC1-201ENST00000373548 TMEM51Q9NW97 253 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 CLIC5Q9NZA1 410 aa20.04■□□□□ 0.8
HDAC1-201ENST00000373548 HMX2A2RU54 273 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 TBX18O95935 607 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 SLC2A3P11169 496 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 RASIP1Q5U651 963 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 AFMIDQ63HM1 303 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 SPATA21Q7Z572 469 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 USP33Q8TEY7 942 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 CCT6BQ92526 530 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 SPATA17Q96L03 361 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 MAFKO60675 156 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 KRT38O76015 456 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 CCNB1P14635 433 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 MNX1P50219 401 aaPredicted RBP20.03■□□□□ 0.8
HDAC1-201ENST00000373548 SMARCB1Q12824 385 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 DUSP4Q13115 394 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 SEPT7Q16181 437 aaKnown RBP20.03■□□□□ 0.8
HDAC1-201ENST00000373548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.03■□□□□ 0.83e-7■■■■□ 24.7
HDAC1-201ENST00000373548 MARK2Q7KZI7 788 aaKnown RBP20.03■□□□□ 0.8
HDAC1-201ENST00000373548 ZNF683Q8IZ20 524 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 ZNF276Q8N554 614 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 ZNF419Q96HQ0 510 aaPredicted RBP20.03■□□□□ 0.8
HDAC1-201ENST00000373548 PITPNM3Q9BZ71 974 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 SLC17A6Q9P2U8 582 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 VANGL2Q9ULK5 521 aa20.03■□□□□ 0.8
HDAC1-201ENST00000373548 CCT8L1PA6NM43 557 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 RFPL1O75677 317 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 TLE2Q04725 743 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 SPRED3Q2MJR0 410 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 OTOP3Q7RTS5 596 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 KLHDC8BQ8IXV7 354 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 LRRC8CQ8TDW0 803 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 MTBPQ96DY7 904 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 TLR8Q9NR97 1041 aaKnown RBP20.02■□□□□ 0.8
HDAC1-201ENST00000373548 CDY1Q9Y6F8 540 aa20.02■□□□□ 0.8
HDAC1-201ENST00000373548 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.02■□□□□ 0.79
HDAC1-201ENST00000373548 WASH4PA8MWX3 477 aa20.02■□□□□ 0.79
HDAC1-201ENST00000373548 ADAM12O43184 909 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms